1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g080050.4.1

Solyc01g080050.4.1


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0003516 (SeedPlants) Phylogenetic Tree(s): OG_06_0003516_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g080050.4.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00002p00198490 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G61950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g08930.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g33450.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_686524g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e003394_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e026643_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 50
No external refs found!