1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g088300.3.1

Solyc01g088300.3.1


Description : Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana (sp|q9fic9|gl115_arath : 203.0)


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0013449 (LandPlants) Phylogenetic Tree(s): OG_05_0013449_tree ,
OG_06_0012548 (SeedPlants) Phylogenetic Tree(s): OG_06_0012548_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g088300.3.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00045p00155350 evm_27.TU.AmTr_v1... Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00089p00121240 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00089p00127600 evm_27.TU.AmTr_v1... Germin-like protein 8-2 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT1G10460 GLP7 germin-like protein 7 0.04 Archaeplastida
AT1G18980 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT1G74820 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT5G20630 ATGER3, GLP3B,... germin 3 0.05 Archaeplastida
AT5G38940 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
GSVIVT01000061001 No alias No description available 0.03 Archaeplastida
GSVIVT01000062001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000063001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000067001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000070001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000103001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016761001 No alias Auxin-binding protein ABP19a OS=Prunus persica 0.06 Archaeplastida
GSVIVT01020142001 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01028220001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
GSVIVT01028222001 No alias Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01031080001 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_05078 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_10684 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_11136 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.08 Archaeplastida
Gb_17046 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.02 Archaeplastida
Gb_18427 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_25391 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_34489 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g22080.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os05g19670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g35750.1 No alias Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g35760.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10255546g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10308226g0010 No alias Putative germin-like protein 2-2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429090g0010 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_270265g0010 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.03 Archaeplastida
MA_42727g0010 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8404570g0010 No alias Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.03 Archaeplastida
MA_926447g0010 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp5g16550.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c23_1340V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1480V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c3_16510V3.1 No alias germin-like protein subfamily 2 member 2 precursor 0.03 Archaeplastida
Smo103237 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo105500 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo109813 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo118954 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc01g102890.4.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.04 Archaeplastida
Solyc01g102910.4.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e005327_P001 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021636_P002 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021637_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e025458_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e039958_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 76 216
No external refs found!