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  5. AMTR_s00025p00249140

AMTR_s00025p00249140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.407

Description : Cell wall.cutin and suberin.biosynthesis regulation.SHN-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0003909 (SeedPlants) Phylogenetic Tree(s): OG_06_0003909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00249140
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00089p00102760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.04 Archaeplastida
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 Archaeplastida
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.02 Archaeplastida
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013934001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01017315001 No alias Cell wall.cutin and suberin.biosynthesis... 0.06 Archaeplastida
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028315001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
Gb_03782 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_08541 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_08781 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_19320 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_25978 No alias Ethylene-responsive transcription factor ABI4... 0.02 Archaeplastida
Gb_26855 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os01g10370.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g13710.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os02g38090.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g52670.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g08470.1 No alias Ethylene-responsive transcription factor 1 OS=Oryza... 0.02 Archaeplastida
LOC_Os04g32620.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g32790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g28350.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os05g49010.1 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os08g41030.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g39810.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10020434g0010 No alias Ethylene-responsive transcription factor ERF013... 0.02 Archaeplastida
MA_10031781g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_10242823g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10274g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_10430231g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_132427g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_364562g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_3758g0010 No alias Ethylene-responsive transcription factor ERF013... 0.02 Archaeplastida
MA_4481564g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_4929994g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_8384767g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_9304g0020 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_97319g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_99821g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
Mp7g00860.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Mp7g09350.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Pp3c1_27710V3.1 No alias cytokinin response factor 2 0.02 Archaeplastida
Pp3c4_27870V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Solyc01g067540.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc01g091760.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc03g006320.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g093540.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc03g093560.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g007170.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g050750.2.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078410.2.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc09g089910.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006139_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015219_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e021331_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022016_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e023686_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.02 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029765_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e032483_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e036130_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e037241_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e040798_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0009668 plastid membrane organization IEP Neighborhood
BP GO:0010027 thylakoid membrane organization IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 5 54
No external refs found!