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  5. AT1G49040

AT1G49040 (SCD1)


Aliases : SCD1

Description : stomatal cytokinesis defective / SCD1 protein (SCD1)


Gene families : OG0004026 (Archaeplastida) Phylogenetic Tree(s): OG0004026_tree ,
OG_05_0006017 (LandPlants) Phylogenetic Tree(s): OG_05_0006017_tree ,
OG_06_0006413 (SeedPlants) Phylogenetic Tree(s): OG_06_0006413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49040
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001574.10 No alias No description available 0.01 Archaeplastida
Cre07.g352900 No alias DENN domain and WD repeat-containing protein SCD1... 0.02 Archaeplastida
Cre12.g511600 No alias No description available 0.02 Archaeplastida
GSVIVT01008260001 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.07 Archaeplastida
Gb_36258 No alias SCD1 component of post-Golgi trafficking SCD complex 0.03 Archaeplastida
LOC_Os01g39380.1 No alias SCD1 component of post-Golgi trafficking SCD complex 0.17 Archaeplastida
MA_411944g0010 No alias DENN domain and WD repeat-containing protein SCD1... 0.03 Archaeplastida
Mp5g20500.1 No alias SCD1 component of post-Golgi trafficking SCD complex 0.04 Archaeplastida
Pp3c26_9700V3.1 No alias stomatal cytokinesis defective / SCD1 protein (SCD1) 0.05 Archaeplastida
Smo118822 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.05 Archaeplastida
Zm00001e020506_P001 No alias SCD1 component of post-Golgi trafficking SCD complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation IMP Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009825 multidimensional cell growth IMP Interproscan
BP GO:0010235 guard mother cell cytokinesis IMP Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0000919 cell plate assembly IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
BP GO:0002790 peptide secretion IEP Neighborhood
BP GO:0002833 positive regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP Neighborhood
MF GO:0004758 serine C-palmitoyltransferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005388 calcium-transporting ATPase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006828 manganese ion transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006896 Golgi to vacuole transport IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009846 pollen germination IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
CC GO:0012505 endomembrane system IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015410 manganese-transporting ATPase activity IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016408 C-acyltransferase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016454 C-palmitoyltransferase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030048 actin filament-based movement IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030276 clathrin binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0032103 positive regulation of response to external stimulus IEP Neighborhood
BP GO:0032922 circadian regulation of gene expression IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0043484 regulation of RNA splicing IEP Neighborhood
BP GO:0043902 positive regulation of multi-organism process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
CC GO:0048471 perinuclear region of cytoplasm IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051011 microtubule minus-end binding IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051177 meiotic sister chromatid cohesion IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP Neighborhood
BP GO:0051455 attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP Neighborhood
BP GO:0052482 defense response by cell wall thickening IEP Neighborhood
BP GO:0052544 defense response by callose deposition in cell wall IEP Neighborhood
MF GO:0052742 phosphatidylinositol kinase activity IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0070273 phosphatidylinositol-4-phosphate binding IEP Neighborhood
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Neighborhood
MF GO:0070300 phosphatidic acid binding IEP Neighborhood
BP GO:0070601 centromeric sister chromatid cohesion IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080119 ER body organization IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901672 positive regulation of systemic acquired resistance IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Neighborhood
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1012 1048
IPR001680 WD40_repeat 834 883
IPR001680 WD40_repeat 893 925
IPR001680 WD40_repeat 930 966
IPR001680 WD40_repeat 1053 1089
IPR001194 cDENN_dom 123 304
IPR005113 uDENN_dom 35 103
No external refs found!