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Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.DNA methylation accessory complex (DDR).DMS3 component
Gene families : OG0001631 (Archaeplastida) Phylogenetic Tree(s): OG0001631_tree ,
OG_05_0001176 (LandPlants) Phylogenetic Tree(s): OG_05_0001176_tree ,
OG_06_0002460 (SeedPlants) Phylogenetic Tree(s): OG_06_0002460_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01038554001 | |
| Cluster | HCCA: Cluster_123 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00227450 | evm_27.TU.AmTr_v1... | Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| MA_217357g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Pp3c22_17800V3.1 | No alias | gamma-irradiation and mitomycin c induced 1 | 0.02 | Archaeplastida | |
| Pp3c8_21182V3.1 | No alias | gamma-irradiation and mitomycin c induced 1 | 0.02 | Archaeplastida | |
| Solyc03g083130.3.1 | No alias | no description available(sp|f4kfs5|gmi1_arath : 874.0) | 0.02 | Archaeplastida | |
| Solyc03g083160.3.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000149 | SNARE binding | IEP | Neighborhood |
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| BP | GO:0006497 | protein lipidation | IEP | Neighborhood |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Neighborhood |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Neighborhood |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006658 | phosphatidylserine metabolic process | IEP | Neighborhood |
| BP | GO:0006659 | phosphatidylserine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Neighborhood |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | Neighborhood |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0019905 | syntaxin binding | IEP | Neighborhood |
| CC | GO:0030880 | RNA polymerase complex | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |