AT1G78770 (APC6)


Aliases : APC6

Description : anaphase promoting complex 6


Gene families : OG0004880 (Archaeplastida) Phylogenetic Tree(s): OG0004880_tree ,
OG_05_0006926 (LandPlants) Phylogenetic Tree(s): OG_05_0006926_tree ,
OG_06_0008431 (SeedPlants) Phylogenetic Tree(s): OG_06_0008431_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78770
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
MA_18243g0020 No alias component APC6 of (APC/C)-dependent ubiquitination arc... 0.03 Archaeplastida
Zm00001e038627_P004 No alias component APC6 of (APC/C)-dependent ubiquitination arc... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle RCA Interproscan
BP GO:0000280 nuclear division RCA Interproscan
BP GO:0000724 double-strand break repair via homologous recombination RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006261 DNA-dependent DNA replication RCA Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0006346 methylation-dependent chromatin silencing RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0007129 synapsis RCA Interproscan
BP GO:0007131 reciprocal meiotic recombination RCA Interproscan
BP GO:0007155 cell adhesion RCA Interproscan
BP GO:0007276 gamete generation RCA Interproscan
BP GO:0008283 cell proliferation RCA Interproscan
BP GO:0009165 nucleotide biosynthetic process RCA Interproscan
BP GO:0009555 pollen development RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010087 phloem or xylem histogenesis IMP Interproscan
BP GO:0010090 trichome morphogenesis RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0010564 regulation of cell cycle process RCA Interproscan
BP GO:0016444 somatic cell DNA recombination RCA Interproscan
BP GO:0016458 gene silencing RCA Interproscan
BP GO:0031047 gene silencing by RNA RCA Interproscan
BP GO:0031048 chromatin silencing by small RNA RCA Interproscan
BP GO:0032875 regulation of DNA endoreduplication IMP Interproscan
BP GO:0032875 regulation of DNA endoreduplication RCA Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0042023 DNA endoreduplication RCA Interproscan
BP GO:0043687 post-translational protein modification RCA Interproscan
BP GO:0045010 actin nucleation RCA Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0051225 spindle assembly RCA Interproscan
BP GO:0051302 regulation of cell division RCA Interproscan
BP GO:0051510 regulation of unidimensional cell growth RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
BP GO:0001933 negative regulation of protein phosphorylation IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004829 threonine-tRNA ligase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005881 cytoplasmic microtubule IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006379 mRNA cleavage IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006435 threonyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006469 negative regulation of protein kinase activity IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0009378 four-way junction helicase activity IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
CC GO:0009574 preprophase band IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0010440 stomatal lineage progression IEP Neighborhood
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022403 cell cycle phase IEP Neighborhood
BP GO:0031109 microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0031400 negative regulation of protein modification process IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033673 negative regulation of kinase activity IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0042326 negative regulation of phosphorylation IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0044111 development involved in symbiotic interaction IEP Neighborhood
BP GO:0044115 development of symbiont involved in interaction with host IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0044848 biological phase IEP Neighborhood
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0045936 negative regulation of phosphate metabolic process IEP Neighborhood
BP GO:0046785 microtubule polymerization IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051322 anaphase IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051348 negative regulation of transferase activity IEP Neighborhood
BP GO:0052093 formation of specialized structure for nutrient acquisition from host IEP Neighborhood
BP GO:0052095 formation of specialized structure for nutrient acquisition from other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052096 formation by symbiont of syncytium involving giant cell for nutrient acquisition from host IEP Neighborhood
CC GO:0055028 cortical microtubule IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019734 TPR_repeat 132 161
IPR011716 TPR-3 312 333
IPR001440 TPR_1 486 517
No external refs found!