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  5. AT2G15580

AT2G15580


Description : RING/U-box superfamily protein


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0002651 (SeedPlants) Phylogenetic Tree(s): OG_06_0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G15580
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020765001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 Archaeplastida
Gb_25302 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g55480.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.02 Archaeplastida
LOC_Os06g08250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g17610.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3413240g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g005650.2.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g007160.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g055330.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016135_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038493_P001 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Neighborhood
MF GO:0000257 nitrilase activity IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity IEP Neighborhood
MF GO:0004760 serine-pyruvate transaminase activity IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006000 fructose metabolic process IEP Neighborhood
BP GO:0006002 fructose 6-phosphate metabolic process IEP Neighborhood
BP GO:0006003 fructose 2,6-bisphosphate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006833 water transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008453 alanine-glyoxylate transaminase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009683 indoleacetic acid metabolic process IEP Neighborhood
BP GO:0009684 indoleacetic acid biosynthetic process IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0009851 auxin biosynthetic process IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009882 blue light photoreceptor activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010148 transpiration IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
BP GO:0010190 cytochrome b6f complex assembly IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP Neighborhood
BP GO:0010375 stomatal complex patterning IEP Neighborhood
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Neighborhood
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Neighborhood
BP GO:0010423 negative regulation of brassinosteroid biosynthetic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010600 regulation of auxin biosynthetic process IEP Neighborhood
BP GO:0010617 circadian regulation of calcium ion oscillation IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0010894 negative regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016420 malonyltransferase activity IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
MF GO:0016815 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
MF GO:0018822 nitrile hydratase activity IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019218 regulation of steroid metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
CC GO:0031897 Tic complex IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
BP GO:0032351 negative regulation of hormone metabolic process IEP Neighborhood
BP GO:0032353 negative regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0036473 cell death in response to oxidative stress IEP Neighborhood
BP GO:0042044 fluid transport IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042435 indole-containing compound biosynthetic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
BP GO:0043609 regulation of carbon utilization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044257 cellular protein catabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045037 protein import into chloroplast stroma IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0045833 negative regulation of lipid metabolic process IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0045939 negative regulation of steroid metabolic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
MF GO:0050281 serine-glyoxylate transaminase activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
MF GO:0050736 O-malonyltransferase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050810 regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051055 negative regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051341 regulation of oxidoreductase activity IEP Neighborhood
BP GO:0051353 positive regulation of oxidoreductase activity IEP Neighborhood
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055067 monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0055078 sodium ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0061077 chaperone-mediated protein folding IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071071 regulation of phospholipid biosynthetic process IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0080061 indole-3-acetonitrile nitrilase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0080109 indole-3-acetonitrile nitrile hydratase activity IEP Neighborhood
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Neighborhood
BP GO:0090032 negative regulation of steroid hormone biosynthetic process IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090354 regulation of auxin metabolic process IEP Neighborhood
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:1902551 regulation of catalase activity IEP Neighborhood
BP GO:1902553 positive regulation of catalase activity IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903725 regulation of phospholipid metabolic process IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000071 regulation of defense response by callose deposition IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
BP GO:2000468 regulation of peroxidase activity IEP Neighborhood
BP GO:2000470 positive regulation of peroxidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 149 191
No external refs found!