Gb_01505


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01505
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.04 Archaeplastida
AT1G26770 ATEXPA10,... expansin A10 0.02 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 Archaeplastida
AT3G55500 EXPA16, ATHEXP... expansin A16 0.03 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 Archaeplastida
GSVIVT01007987001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10299189g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_200461g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g20430.1 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.02 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Solyc01g010890.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc06g051800.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 65 149
IPR007117 Expansin_CBD 161 238
No external refs found!