AT2G21710 (EMB2219)

Aliases : EMB2219

Description : Mitochondrial transcription termination factor family protein

Gene families : OG0001159 (Archaeplastida) Phylogenetic Tree(s): OG0001159_tree ,
OG_05_0008403 (LandPlants) Phylogenetic Tree(s): OG_05_0008403_tree ,
OG_06_0009405 (SeedPlants) Phylogenetic Tree(s): OG_06_0009405_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G21710
Cluster	HCCA: Cluster_247

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00234800	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.04	Archaeplastida
GSVIVT01011061001	No alias	RNA processing.organelle machineries.RNA...	0.03	Archaeplastida
GSVIVT01031970001	No alias	RNA biosynthesis.organelle...	0.04	Archaeplastida
Gb_07758	No alias	transcription factor (mTERF)	0.03	Archaeplastida
Gb_36311	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.05	Archaeplastida
LOC_Os05g33500.1	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	Archaeplastida
Mp1g22560.1	No alias	transcription factor (mTERF)	0.04	Archaeplastida
Pp3c14_12200V3.1	No alias	Mitochondrial transcription termination factor family protein	0.03	Archaeplastida
Pp3c1_25410V3.1	No alias	Mitochondrial transcription termination factor family protein	0.03	Archaeplastida
Solyc01g109630.4.1	No alias	transcription factor (mTERF)	0.06	Archaeplastida
Solyc04g005630.3.1	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	Archaeplastida
Zm00001e027106_P001	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.02	Archaeplastida
Zm00001e032771_P001	No alias	transcription factor (mTERF)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	Neighborhood
BP	GO:0000025	maltose catabolic process	IEP	Neighborhood
MF	GO:0000064	L-ornithine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0000095	S-adenosyl-L-methionine transmembrane transporter activity	IEP	Neighborhood
BP	GO:0000470	maturation of LSU-rRNA	IEP	Neighborhood
BP	GO:0000488	maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	IEP	Neighborhood
BP	GO:0000489	maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	IEP	Neighborhood
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Neighborhood
MF	GO:0003941	L-serine ammonia-lyase activity	IEP	Neighborhood
MF	GO:0004133	glycogen debranching enzyme activity	IEP	Neighborhood
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004556	alpha-amylase activity	IEP	Neighborhood
MF	GO:0004561	alpha-N-acetylglucosaminidase activity	IEP	Neighborhood
MF	GO:0004784	superoxide dismutase activity	IEP	Neighborhood
MF	GO:0005290	L-histidine transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005743	mitochondrial inner membrane	IEP	Neighborhood
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEP	Neighborhood
BP	GO:0005983	starch catabolic process	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006268	DNA unwinding involved in DNA replication	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006563	L-serine metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006839	mitochondrial transport	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
BP	GO:0008285	negative regulation of cell proliferation	IEP	Neighborhood
MF	GO:0008721	D-serine ammonia-lyase activity	IEP	Neighborhood
MF	GO:0008864	formyltetrahydrofolate deformylase activity	IEP	Neighborhood
BP	GO:0009251	glucan catabolic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009313	oligosaccharide catabolic process	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
CC	GO:0009501	amyloplast	IEP	Neighborhood
CC	GO:0009526	plastid envelope	IEP	Neighborhood
BP	GO:0009657	plastid organization	IEP	Neighborhood
BP	GO:0009658	chloroplast organization	IEP	Neighborhood
BP	GO:0009668	plastid membrane organization	IEP	Neighborhood
CC	GO:0009941	chloroplast envelope	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0010020	chloroplast fission	IEP	Neighborhood
BP	GO:0010021	amylopectin biosynthetic process	IEP	Neighborhood
BP	GO:0010027	thylakoid membrane organization	IEP	Neighborhood
BP	GO:0010099	regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010207	photosystem II assembly	IEP	Neighborhood
CC	GO:0010368	chloroplast isoamylase complex	IEP	Neighborhood
BP	GO:0010496	intercellular transport	IEP	Neighborhood
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	Neighborhood
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010628	positive regulation of gene expression	IEP	Neighborhood
MF	GO:0015173	aromatic amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015174	basic amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015181	arginine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015189	L-lysine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015238	drug transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015805	S-adenosyl-L-methionine transport	IEP	Neighborhood
MF	GO:0015929	hexosaminidase activity	IEP	Neighborhood
BP	GO:0016032	viral process	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
BP	GO:0016556	mRNA modification	IEP	Neighborhood
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016841	ammonia-lyase activity	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0017118	lipoyltransferase activity	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
MF	GO:0019156	isoamylase activity	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0019866	organelle inner membrane	IEP	Neighborhood
MF	GO:0030378	serine racemase activity	IEP	Neighborhood
BP	GO:0030490	maturation of SSU-rRNA	IEP	Neighborhood
BP	GO:0031123	RNA 3'-end processing	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0031425	chloroplast RNA processing	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031967	organelle envelope	IEP	Neighborhood
CC	GO:0031975	envelope	IEP	Neighborhood
BP	GO:0032392	DNA geometric change	IEP	Neighborhood
BP	GO:0032508	DNA duplex unwinding	IEP	Neighborhood
BP	GO:0032544	plastid translation	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0035303	regulation of dephosphorylation	IEP	Neighborhood
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Neighborhood
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	IEP	Neighborhood
BP	GO:0040011	locomotion	IEP	Neighborhood
CC	GO:0042644	chloroplast nucleoid	IEP	Neighborhood
CC	GO:0042646	plastid nucleoid	IEP	Neighborhood
BP	GO:0042780	tRNA 3'-end processing	IEP	Neighborhood
MF	GO:0042781	3'-tRNA processing endoribonuclease activity	IEP	Neighborhood
BP	GO:0042793	plastid transcription	IEP	Neighborhood
CC	GO:0043033	isoamylase complex	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043572	plastid fission	IEP	Neighborhood
BP	GO:0043628	ncRNA 3'-end processing	IEP	Neighborhood
BP	GO:0044000	movement in host	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Neighborhood
BP	GO:0044403	symbiont process	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044434	chloroplast part	IEP	Neighborhood
CC	GO:0044435	plastid part	IEP	Neighborhood
BP	GO:0044766	multi-organism transport	IEP	Neighborhood
BP	GO:0045036	protein targeting to chloroplast	IEP	Neighborhood
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0045962	positive regulation of development, heterochronic	IEP	Neighborhood
BP	GO:0046352	disaccharide catabolic process	IEP	Neighborhood
BP	GO:0046416	D-amino acid metabolic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0046739	transport of virus in multicellular host	IEP	Neighborhood
BP	GO:0046794	transport of virus	IEP	Neighborhood
MF	GO:0047661	amino-acid racemase activity	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051181	cofactor transport	IEP	Neighborhood
BP	GO:0051182	coenzyme transport	IEP	Neighborhood
MF	GO:0051184	cofactor transmembrane transporter activity	IEP	Neighborhood
MF	GO:0051185	coenzyme transmembrane transporter activity	IEP	Neighborhood
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051814	movement in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052126	movement in host environment	IEP	Neighborhood
BP	GO:0052192	movement in environment of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood
BP	GO:0070178	D-serine metabolic process	IEP	Neighborhood
MF	GO:0070180	large ribosomal subunit rRNA binding	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	Neighborhood
BP	GO:0072598	protein localization to chloroplast	IEP	Neighborhood
BP	GO:0080156	mitochondrial mRNA modification	IEP	Neighborhood
BP	GO:0080158	obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1900864	mitochondrial RNA modification	IEP	Neighborhood
BP	GO:1901259	chloroplast rRNA processing	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
MF	GO:1901474	azole transmembrane transporter activity	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood
BP	GO:1902579	multi-organism localization	IEP	Neighborhood
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000030	regulation of response to red or far red light	IEP	Neighborhood
BP	GO:2000896	amylopectin metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003690	MTERF	245	360
IPR003690	MTERF	322	593

External Links

No external refs found!

AT2G21710 (EMB2219)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation