Gb_11202

Description : subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000418 (LandPlants) Phylogenetic Tree(s): OG_05_0000418_tree ,
OG_06_0000295 (SeedPlants) Phylogenetic Tree(s): OG_06_0000295_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_11202
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00128080	evm_27.TU.AmTr_v1...	Putative multidrug resistance protein OS=Oryza sativa...	0.03	Archaeplastida
AMTR_s00076p00195870	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00145p00075460	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT2G39480	PGP6	P-glycoprotein 6	0.04	Archaeplastida
AT3G28860	ABCB19,...	ATP binding cassette subfamily B19	0.03	Archaeplastida
AT4G18050	PGP9	P-glycoprotein 9	0.02	Archaeplastida
GSVIVT01028256001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01033645001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Gb_10215	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g74470.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.04	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp2g02910.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.1	Archaeplastida
Mp2g06270.1	No alias	subfamily ABCB transporter	0.09	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Pp3c1_7215V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c9_13390V3.1	No alias	P-glycoprotein 6	0.02	Archaeplastida
Zm00001e003866_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e014797_P002	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e017444_P002	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e018488_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e021746_P001	No alias	ABC transporter B family member 2 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e038462_P002	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Zm00001e041008_P003	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006013	mannose metabolic process	IEP	Neighborhood
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Neighborhood
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007018	microtubule-based movement	IEP	Neighborhood
BP	GO:0007155	cell adhesion	IEP	Neighborhood
MF	GO:0008017	microtubule binding	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016421	CoA carboxylase activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
BP	GO:0022610	biological adhesion	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030126	COPI vesicle coat	IEP	Neighborhood
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	77	352
IPR011527	ABC1_TM_dom	759	1030
IPR003439	ABC_transporter-like	422	569
IPR003439	ABC_transporter-like	1100	1248

External Links

No external refs found!

Gb_11202

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation