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  5. Gb_11824

Gb_11824


Description : no hits & (original description: none)


Gene families : OG0001211 (Archaeplastida) Phylogenetic Tree(s): OG0001211_tree ,
OG_05_0000742 (LandPlants) Phylogenetic Tree(s): OG_05_0000742_tree ,
OG_06_0000399 (SeedPlants) Phylogenetic Tree(s): OG_06_0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11824
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00245800 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00063p00151320 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G28190 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
AT5G12340 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
GSVIVT01037265001 No alias No description available 0.03 Archaeplastida
Gb_10892 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g72360.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g46510.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10381881g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434596g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435613g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_134509g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_168522g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_218732g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_223132g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_311429g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_374419g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5824616g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_74636g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_88642g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c1_38210V3.1 No alias No annotation 0.03 Archaeplastida
Solyc04g057830.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011175_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018591_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 202
No external refs found!