AT2G27310

Description : F-box family protein

Gene families : OG0001951 (Archaeplastida) Phylogenetic Tree(s): OG0001951_tree ,
OG_05_0001385 (LandPlants) Phylogenetic Tree(s): OG_05_0001385_tree ,
OG_06_0004269 (SeedPlants) Phylogenetic Tree(s): OG_06_0004269_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G27310
Cluster	HCCA: Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00031290	evm_27.TU.AmTr_v1...	F-box protein At2g27310 OS=Arabidopsis thaliana	0.05	Archaeplastida
AMTR_s00025p00055630	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
AMTR_s00114p00120290	evm_27.TU.AmTr_v1...	Probable F-box protein At2g36090 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01011119001	No alias	Probable F-box protein At2g36090 OS=Arabidopsis thaliana	0.04	Archaeplastida
Gb_11568	No alias	SLY-type gibberellin signal transducer. component F-box...	0.03	Archaeplastida
Gb_13305	No alias	SLY-type gibberellin signal transducer. component F-box...	0.04	Archaeplastida
LOC_Os12g06030.1	No alias	Probable F-box protein At2g36090 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Mp5g06150.1	No alias	SLY-type gibberellin signal transducer. component F-box...	0.06	Archaeplastida
Pp3c20_18520V3.1	No alias	F-box family protein	0.04	Archaeplastida
Smo80605	No alias	Probable F-box protein At2g36090 OS=Arabidopsis thaliana	0.03	Archaeplastida
Solyc10g083230.1.1	No alias	Probable F-box protein At2g36090 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc11g068710.3.1	No alias	Probable F-box protein At2g36090 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e001713_P001	No alias	F-box protein At2g27310 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e014737_P001	No alias	Probable F-box protein At2g36090 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e040837_P001	No alias	Probable F-box protein At2g36090 OS=Arabidopsis thaliana...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002679	respiratory burst involved in defense response	RCA	Interproscan
MF	GO:0003674	molecular_function	ND	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009414	response to water deprivation	RCA	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	RCA	Interproscan
BP	GO:0009738	abscisic acid-activated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009873	ethylene-activated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010286	heat acclimation	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0035556	intracellular signal transduction	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
BP	GO:0042493	response to drug	None	Extended
BP	GO:0042538	hyperosmotic salinity response	RCA	Interproscan
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0045730	respiratory burst	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	Neighborhood
MF	GO:0001664	G-protein coupled receptor binding	IEP	Neighborhood
BP	GO:0002682	regulation of immune system process	IEP	Neighborhood
MF	GO:0003933	GTP cyclohydrolase activity	IEP	Neighborhood
MF	GO:0003935	GTP cyclohydrolase II activity	IEP	Neighborhood
MF	GO:0005355	glucose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005356	glucose:proton symporter activity	IEP	Neighborhood
MF	GO:0005358	high-affinity glucose:proton symporter activity	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0005983	starch catabolic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006771	riboflavin metabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006862	nucleotide transport	IEP	Neighborhood
BP	GO:0006865	amino acid transport	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0006984	ER-nucleus signaling pathway	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007187	G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	IEP	Neighborhood
BP	GO:0007188	adenylate cyclase-modulating G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
BP	GO:0008643	carbohydrate transport	IEP	Neighborhood
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Neighborhood
BP	GO:0009231	riboflavin biosynthetic process	IEP	Neighborhood
BP	GO:0009251	glucan catabolic process	IEP	Neighborhood
BP	GO:0009403	toxin biosynthetic process	IEP	Neighborhood
BP	GO:0009404	toxin metabolic process	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009595	detection of biotic stimulus	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009612	response to mechanical stimulus	IEP	Neighborhood
BP	GO:0009617	response to bacterium	IEP	Neighborhood
BP	GO:0009620	response to fungus	IEP	Neighborhood
BP	GO:0009626	plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0009627	systemic acquired resistance	IEP	Neighborhood
BP	GO:0009646	response to absence of light	IEP	Neighborhood
BP	GO:0009652	thigmotropism	IEP	Neighborhood
MF	GO:0009679	hexose:proton symporter activity	IEP	Neighborhood
BP	GO:0009694	jasmonic acid metabolic process	IEP	Neighborhood
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009696	salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0009697	salicylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009700	indole phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0009746	response to hexose	IEP	Neighborhood
BP	GO:0009749	response to glucose	IEP	Neighborhood
BP	GO:0009753	response to jasmonic acid	IEP	Neighborhood
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
BP	GO:0009896	positive regulation of catabolic process	IEP	Neighborhood
BP	GO:0010120	camalexin biosynthetic process	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
MF	GO:0010178	IAA-amino acid conjugate hydrolase activity	IEP	Neighborhood
MF	GO:0010179	IAA-Ala conjugate hydrolase activity	IEP	Neighborhood
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0010506	regulation of autophagy	IEP	Neighborhood
BP	GO:0010508	positive regulation of autophagy	IEP	Neighborhood
BP	GO:0010555	response to mannitol	IEP	Neighborhood
BP	GO:0010941	regulation of cell death	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015149	hexose transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015749	monosaccharide transmembrane transport	IEP	Neighborhood
BP	GO:0015802	basic amino acid transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017000	antibiotic biosynthetic process	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
BP	GO:0018958	phenol-containing compound metabolic process	IEP	Neighborhood
MF	GO:0019238	cyclohydrolase activity	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0019897	extrinsic component of plasma membrane	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0023014	signal transduction by protein phosphorylation	IEP	Neighborhood
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Neighborhood
CC	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	IEP	Neighborhood
BP	GO:0031329	regulation of cellular catabolic process	IEP	Neighborhood
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
BP	GO:0031348	negative regulation of defense response	IEP	Neighborhood
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Neighborhood
BP	GO:0032350	regulation of hormone metabolic process	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033037	polysaccharide localization	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034050	host programmed cell death induced by symbiont	IEP	Neighborhood
BP	GO:0034219	carbohydrate transmembrane transport	IEP	Neighborhood
BP	GO:0034284	response to monosaccharide	IEP	Neighborhood
BP	GO:0034605	cellular response to heat	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Neighborhood
BP	GO:0035690	cellular response to drug	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0042742	defense response to bacterium	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0043067	regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043069	negative regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043090	amino acid import	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043900	regulation of multi-organism process	IEP	Neighborhood
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0045088	regulation of innate immune response	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0046217	indole phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048585	negative regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0050776	regulation of immune response	IEP	Neighborhood
BP	GO:0050832	defense response to fungus	IEP	Neighborhood
MF	GO:0051119	sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051193	regulation of cofactor metabolic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051606	detection of stimulus	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0052314	phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0052317	camalexin metabolic process	IEP	Neighborhood
BP	GO:0052542	defense response by callose deposition	IEP	Neighborhood
BP	GO:0052545	callose localization	IEP	Neighborhood
BP	GO:0060548	negative regulation of cell death	IEP	Neighborhood
BP	GO:0070370	cellular heat acclimation	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0071323	cellular response to chitin	IEP	Neighborhood
BP	GO:0071417	cellular response to organonitrogen compound	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
BP	GO:1901420	negative regulation of response to alcohol	IEP	Neighborhood
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Neighborhood
BP	GO:1901699	cellular response to nitrogen compound	IEP	Neighborhood
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	Neighborhood
BP	GO:2000067	regulation of root morphogenesis	IEP	Neighborhood
BP	GO:2000280	regulation of root development	IEP	Neighborhood
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G27310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation