Coexpression cluster: Cluster_29 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044464 cell part 9.52% (6/63) 2.04 0.003367 0.031314
GO:1901566 organonitrogen compound biosynthetic process 6.35% (4/63) 2.65 0.003879 0.031368
GO:0006518 peptide metabolic process 4.76% (3/63) 3.3 0.003586 0.031761
GO:0043603 cellular amide metabolic process 4.76% (3/63) 3.21 0.004275 0.031808
GO:0043043 peptide biosynthetic process 4.76% (3/63) 3.34 0.003292 0.032232
GO:0003735 structural constituent of ribosome 4.76% (3/63) 3.34 0.003292 0.032232
GO:0005198 structural molecule activity 4.76% (3/63) 3.22 0.004164 0.032274
GO:0043604 amide biosynthetic process 4.76% (3/63) 3.26 0.003842 0.032485
GO:0009059 macromolecule biosynthetic process 6.35% (4/63) 2.72 0.003202 0.035036
GO:0006412 translation 4.76% (3/63) 3.36 0.003151 0.036636
GO:0009435 NAD biosynthetic process 1.59% (1/63) 8.36 0.003048 0.037794
GO:0030515 snoRNA binding 1.59% (1/63) 8.36 0.003048 0.037794
GO:0019674 NAD metabolic process 1.59% (1/63) 8.36 0.003048 0.037794
GO:0030008 TRAPP complex 1.59% (1/63) 8.36 0.003048 0.037794
GO:0008541 proteasome regulatory particle, lid subcomplex 1.59% (1/63) 8.36 0.003048 0.037794
GO:0050658 RNA transport 1.59% (1/63) 7.03 0.007603 0.041591
GO:0051236 establishment of RNA localization 1.59% (1/63) 7.03 0.007603 0.041591
GO:0051028 mRNA transport 1.59% (1/63) 7.03 0.007603 0.041591
GO:0051168 nuclear export 1.59% (1/63) 7.03 0.007603 0.041591
GO:0006406 mRNA export from nucleus 1.59% (1/63) 7.03 0.007603 0.041591
GO:0006405 RNA export from nucleus 1.59% (1/63) 7.03 0.007603 0.041591
GO:0050657 nucleic acid transport 1.59% (1/63) 7.03 0.007603 0.041591
GO:0005956 protein kinase CK2 complex 1.59% (1/63) 7.36 0.006087 0.043543
GO:1901576 organic substance biosynthetic process 7.94% (5/63) 2.0 0.008253 0.043859
GO:0044249 cellular biosynthetic process 7.94% (5/63) 2.07 0.00676 0.04657
GO:0009058 biosynthetic process 9.52% (6/63) 2.12 0.00253 0.047053
GO:0001510 RNA methylation 1.59% (1/63) 6.77 0.009116 0.047101
GO:0080009 mRNA methylation 1.59% (1/63) 9.36 0.001525 0.047278
GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity 1.59% (1/63) 9.36 0.001525 0.047278
GO:0016556 mRNA modification 1.59% (1/63) 9.36 0.001525 0.047278
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_23 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_25 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_256 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_114 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_171 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_242 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_212 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_345 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_222 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_221 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_318 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_350 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_351 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_200 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_218 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.069 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_268 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.055 Archaeplastida Compare
Vitis vinifera HCCA Cluster_119 0.026 Archaeplastida Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms