Coexpression cluster: Cluster_151 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044434 chloroplast part 66.1% (39/59) 3.92 0.0 0.0
GO:0044435 plastid part 66.1% (39/59) 3.88 0.0 0.0
GO:0009536 plastid 84.75% (50/59) 2.62 0.0 0.0
GO:0009507 chloroplast 83.05% (49/59) 2.62 0.0 0.0
GO:0044422 organelle part 66.1% (39/59) 2.56 0.0 0.0
GO:0044446 intracellular organelle part 66.1% (39/59) 2.56 0.0 0.0
GO:0009579 thylakoid 32.2% (19/59) 4.77 0.0 0.0
GO:0055035 plastid thylakoid membrane 30.51% (18/59) 4.73 0.0 0.0
GO:0009535 chloroplast thylakoid membrane 30.51% (18/59) 4.74 0.0 0.0
GO:0042651 thylakoid membrane 30.51% (18/59) 4.68 0.0 0.0
GO:0034357 photosynthetic membrane 30.51% (18/59) 4.68 0.0 0.0
GO:0010207 photosystem II assembly 25.42% (15/59) 5.32 0.0 0.0
GO:0044436 thylakoid part 30.51% (18/59) 4.47 0.0 0.0
GO:0009657 plastid organization 27.12% (16/59) 4.63 0.0 0.0
GO:0031976 plastid thylakoid 23.73% (14/59) 4.95 0.0 0.0
GO:0009534 chloroplast thylakoid 23.73% (14/59) 4.95 0.0 0.0
GO:0009941 chloroplast envelope 30.51% (18/59) 3.98 0.0 0.0
GO:0009526 plastid envelope 30.51% (18/59) 3.96 0.0 0.0
GO:0044444 cytoplasmic part 86.44% (51/59) 1.32 0.0 0.0
GO:0031975 envelope 30.51% (18/59) 3.81 0.0 0.0
GO:0031967 organelle envelope 30.51% (18/59) 3.81 0.0 0.0
GO:0034622 cellular protein-containing complex assembly 27.12% (16/59) 4.04 0.0 0.0
GO:0015994 chlorophyll metabolic process 20.34% (12/59) 5.04 0.0 0.0
GO:0051186 cofactor metabolic process 33.9% (20/59) 3.34 0.0 0.0
GO:0065003 protein-containing complex assembly 27.12% (16/59) 3.98 0.0 0.0
GO:0043933 protein-containing complex subunit organization 27.12% (16/59) 3.95 0.0 0.0
GO:0006778 porphyrin-containing compound metabolic process 20.34% (12/59) 4.81 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 20.34% (12/59) 4.8 0.0 0.0
GO:0008152 metabolic process 76.27% (45/59) 1.41 0.0 0.0
GO:0006098 pentose-phosphate shunt 18.64% (11/59) 4.87 0.0 0.0
GO:0051156 glucose 6-phosphate metabolic process 18.64% (11/59) 4.82 0.0 0.0
GO:0019682 glyceraldehyde-3-phosphate metabolic process 22.03% (13/59) 4.21 0.0 0.0
GO:0006739 NADP metabolic process 18.64% (11/59) 4.79 0.0 0.0
GO:0009987 cellular process 81.36% (48/59) 1.22 0.0 0.0
GO:0031984 organelle subcompartment 23.73% (14/59) 3.85 0.0 0.0
GO:0022607 cellular component assembly 27.12% (16/59) 3.37 0.0 0.0
GO:0042440 pigment metabolic process 20.34% (12/59) 4.21 0.0 0.0
GO:0044237 cellular metabolic process 69.49% (41/59) 1.44 0.0 0.0
GO:0006364 rRNA processing 18.64% (11/59) 4.47 0.0 0.0
GO:0009658 chloroplast organization 18.64% (11/59) 4.46 0.0 0.0
GO:0016072 rRNA metabolic process 18.64% (11/59) 4.44 0.0 0.0
GO:0006081 cellular aldehyde metabolic process 22.03% (13/59) 3.84 0.0 0.0
GO:0034470 ncRNA processing 18.64% (11/59) 4.27 0.0 0.0
GO:0009668 plastid membrane organization 16.95% (10/59) 4.57 0.0 0.0
GO:0010027 thylakoid membrane organization 16.95% (10/59) 4.57 0.0 0.0
GO:0061024 membrane organization 16.95% (10/59) 4.48 0.0 0.0
GO:0071704 organic substance metabolic process 67.8% (40/59) 1.35 0.0 0.0
GO:0006807 nitrogen compound metabolic process 57.63% (34/59) 1.57 0.0 0.0
GO:0016043 cellular component organization 42.37% (25/59) 2.07 0.0 0.0
GO:0034660 ncRNA metabolic process 18.64% (11/59) 3.89 0.0 0.0
GO:0009570 chloroplast stroma 22.03% (13/59) 3.37 0.0 0.0
GO:0009532 plastid stroma 22.03% (13/59) 3.37 0.0 0.0
GO:0046496 nicotinamide nucleotide metabolic process 18.64% (11/59) 3.8 0.0 0.0
GO:0019362 pyridine nucleotide metabolic process 18.64% (11/59) 3.78 0.0 0.0
GO:0072524 pyridine-containing compound metabolic process 18.64% (11/59) 3.75 0.0 0.0
GO:0071840 cellular component organization or biogenesis 42.37% (25/59) 1.97 0.0 0.0
GO:0035304 regulation of protein dephosphorylation 13.56% (8/59) 4.75 0.0 0.0
GO:0035303 regulation of dephosphorylation 13.56% (8/59) 4.74 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 49.15% (29/59) 1.71 0.0 0.0
GO:0031977 thylakoid lumen 11.86% (7/59) 5.22 0.0 0.0
GO:1901135 carbohydrate derivative metabolic process 27.12% (16/59) 2.77 0.0 0.0
GO:0006996 organelle organization 28.81% (17/59) 2.64 0.0 0.0
GO:0000023 maltose metabolic process 13.56% (8/59) 4.62 0.0 0.0
GO:0006733 oxidoreduction coenzyme metabolic process 18.64% (11/59) 3.6 0.0 0.0
GO:0015996 chlorophyll catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0033015 tetrapyrrole catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0006787 porphyrin-containing compound catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0046149 pigment catabolic process 10.17% (6/59) 5.68 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 32.2% (19/59) 2.29 0.0 0.0
GO:0046483 heterocycle metabolic process 40.68% (24/59) 1.89 0.0 0.0
GO:0006793 phosphorus metabolic process 32.2% (19/59) 2.27 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 42.37% (25/59) 1.82 0.0 0.0
GO:0019252 starch biosynthetic process 13.56% (8/59) 4.33 0.0 0.0
GO:0005984 disaccharide metabolic process 13.56% (8/59) 4.28 0.0 0.0
GO:0051174 regulation of phosphorus metabolic process 13.56% (8/59) 4.26 0.0 0.0
GO:0019220 regulation of phosphate metabolic process 13.56% (8/59) 4.26 0.0 0.0
GO:0031399 regulation of protein modification process 13.56% (8/59) 4.22 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 40.68% (24/59) 1.81 0.0 0.0
GO:0051187 cofactor catabolic process 11.86% (7/59) 4.66 0.0 0.0
GO:0019637 organophosphate metabolic process 25.42% (15/59) 2.62 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 42.37% (25/59) 1.75 0.0 0.0
GO:0009311 oligosaccharide metabolic process 13.56% (8/59) 4.16 0.0 0.0
GO:0005982 starch metabolic process 13.56% (8/59) 4.05 0.0 0.0
GO:0006732 coenzyme metabolic process 18.64% (11/59) 3.15 0.0 0.0
GO:0019693 ribose phosphate metabolic process 18.64% (11/59) 3.08 0.0 1e-06
GO:0009902 chloroplast relocation 10.17% (6/59) 4.77 0.0 1e-06
GO:0051667 establishment of plastid localization 10.17% (6/59) 4.77 0.0 1e-06
GO:0051644 plastid localization 10.17% (6/59) 4.76 0.0 1e-06
GO:0019750 chloroplast localization 10.17% (6/59) 4.76 0.0 1e-06
GO:0009617 response to bacterium 16.95% (10/59) 3.22 0.0 1e-06
GO:0051656 establishment of organelle localization 10.17% (6/59) 4.73 0.0 1e-06
GO:0032268 regulation of cellular protein metabolic process 13.56% (8/59) 3.79 0.0 1e-06
GO:0015995 chlorophyll biosynthetic process 10.17% (6/59) 4.68 0.0 1e-06
GO:0051246 regulation of protein metabolic process 13.56% (8/59) 3.75 0.0 1e-06
GO:0016070 RNA metabolic process 25.42% (15/59) 2.34 0.0 1e-06
GO:0009250 glucan biosynthetic process 13.56% (8/59) 3.73 0.0 1e-06
GO:1901565 organonitrogen compound catabolic process 16.95% (10/59) 3.15 0.0 1e-06
GO:0043085 positive regulation of catalytic activity 10.17% (6/59) 4.6 0.0 1e-06
GO:0044093 positive regulation of molecular function 10.17% (6/59) 4.57 0.0 2e-06
GO:0043170 macromolecule metabolic process 45.76% (27/59) 1.43 0.0 2e-06
GO:0009058 biosynthetic process 42.37% (25/59) 1.52 0.0 2e-06
GO:0010304 PSII associated light-harvesting complex II catabolic process 6.78% (4/59) 6.07 0.0 3e-06
GO:0009543 chloroplast thylakoid lumen 8.47% (5/59) 5.04 0.0 3e-06
GO:0031978 plastid thylakoid lumen 8.47% (5/59) 5.04 0.0 3e-06
GO:0044257 cellular protein catabolic process 6.78% (4/59) 6.01 0.0 3e-06
GO:0006779 porphyrin-containing compound biosynthetic process 10.17% (6/59) 4.38 0.0 3e-06
GO:0009117 nucleotide metabolic process 18.64% (11/59) 2.78 0.0 3e-06
GO:0006753 nucleoside phosphate metabolic process 18.64% (11/59) 2.78 0.0 3e-06
GO:0033014 tetrapyrrole biosynthetic process 10.17% (6/59) 4.34 1e-06 4e-06
GO:0044249 cellular biosynthetic process 38.98% (23/59) 1.57 1e-06 4e-06
GO:0008150 biological_process 98.31% (58/59) 0.4 1e-06 4e-06
GO:0006396 RNA processing 18.64% (11/59) 2.72 1e-06 5e-06
GO:0044238 primary metabolic process 52.54% (31/59) 1.16 1e-06 8e-06
GO:0006139 nucleobase-containing compound metabolic process 32.2% (19/59) 1.76 1e-06 8e-06
GO:0055086 nucleobase-containing small molecule metabolic process 18.64% (11/59) 2.64 1e-06 8e-06
GO:0006073 cellular glucan metabolic process 13.56% (8/59) 3.33 1e-06 8e-06
GO:0044042 glucan metabolic process 13.56% (8/59) 3.33 1e-06 8e-06
GO:0019761 glucosinolate biosynthetic process 10.17% (6/59) 4.06 2e-06 1e-05
GO:0016144 S-glycoside biosynthetic process 10.17% (6/59) 4.06 2e-06 1e-05
GO:0019758 glycosinolate biosynthetic process 10.17% (6/59) 4.06 2e-06 1e-05
GO:0042742 defense response to bacterium 13.56% (8/59) 3.27 2e-06 1e-05
GO:0044281 small molecule metabolic process 32.2% (19/59) 1.72 2e-06 1.2e-05
GO:0043231 intracellular membrane-bounded organelle 88.14% (52/59) 0.55 2e-06 1.2e-05
GO:0051640 organelle localization 10.17% (6/59) 4.0 2e-06 1.3e-05
GO:0043227 membrane-bounded organelle 88.14% (52/59) 0.55 2e-06 1.3e-05
GO:1901659 glycosyl compound biosynthetic process 10.17% (6/59) 3.98 2e-06 1.3e-05
GO:0016109 tetraterpenoid biosynthetic process 8.47% (5/59) 4.54 3e-06 1.5e-05
GO:0016117 carotenoid biosynthetic process 8.47% (5/59) 4.54 3e-06 1.5e-05
GO:1901576 organic substance biosynthetic process 38.98% (23/59) 1.44 3e-06 1.7e-05
GO:0008299 isoprenoid biosynthetic process 11.86% (7/59) 3.48 3e-06 1.8e-05
GO:0016116 carotenoid metabolic process 8.47% (5/59) 4.47 3e-06 1.8e-05
GO:0016108 tetraterpenoid metabolic process 8.47% (5/59) 4.47 3e-06 1.8e-05
GO:0043229 intracellular organelle 88.14% (52/59) 0.54 3e-06 1.9e-05
GO:0043226 organelle 88.14% (52/59) 0.54 3e-06 1.9e-05
GO:0009735 response to cytokinin 10.17% (6/59) 3.81 4e-06 2.4e-05
GO:0050790 regulation of catalytic activity 10.17% (6/59) 3.81 4e-06 2.4e-05
GO:0019757 glycosinolate metabolic process 10.17% (6/59) 3.8 5e-06 2.5e-05
GO:0016143 S-glycoside metabolic process 10.17% (6/59) 3.8 5e-06 2.5e-05
GO:0019760 glucosinolate metabolic process 10.17% (6/59) 3.8 5e-06 2.5e-05
GO:0006720 isoprenoid metabolic process 11.86% (7/59) 3.36 5e-06 2.8e-05
GO:0033692 cellular polysaccharide biosynthetic process 13.56% (8/59) 2.98 7e-06 3.9e-05
GO:0044272 sulfur compound biosynthetic process 13.56% (8/59) 2.98 7e-06 3.9e-05
GO:0044260 cellular macromolecule metabolic process 35.59% (21/59) 1.44 1e-05 5e-05
GO:1901657 glycosyl compound metabolic process 10.17% (6/59) 3.56 1.2e-05 6.1e-05
GO:0034637 cellular carbohydrate biosynthetic process 13.56% (8/59) 2.88 1.2e-05 6.4e-05
GO:0046148 pigment biosynthetic process 10.17% (6/59) 3.54 1.3e-05 6.5e-05
GO:0090304 nucleic acid metabolic process 25.42% (15/59) 1.81 1.4e-05 7.2e-05
GO:0016020 membrane 40.68% (24/59) 1.26 1.5e-05 7.3e-05
GO:0065009 regulation of molecular function 10.17% (6/59) 3.51 1.4e-05 7.3e-05
GO:0051188 cofactor biosynthetic process 13.56% (8/59) 2.84 1.5e-05 7.6e-05
GO:0042793 plastid transcription 6.78% (4/59) 4.72 1.6e-05 8e-05
GO:0019684 photosynthesis, light reaction 8.47% (5/59) 3.99 1.6e-05 8.1e-05
GO:0051649 establishment of localization in cell 18.64% (11/59) 2.2 2.1e-05 0.000105
GO:0000271 polysaccharide biosynthetic process 13.56% (8/59) 2.74 2.5e-05 0.000122
GO:0044264 cellular polysaccharide metabolic process 13.56% (8/59) 2.73 2.5e-05 0.000122
GO:0051641 cellular localization 18.64% (11/59) 2.07 4.9e-05 0.000236
GO:0044550 secondary metabolite biosynthetic process 10.17% (6/59) 3.18 5.2e-05 0.000247
GO:0010218 response to far red light 6.78% (4/59) 4.24 6e-05 0.000287
GO:0019439 aromatic compound catabolic process 11.86% (7/59) 2.81 6.1e-05 0.000288
GO:0044270 cellular nitrogen compound catabolic process 11.86% (7/59) 2.81 6.1e-05 0.000288
GO:0046700 heterocycle catabolic process 11.86% (7/59) 2.8 6.3e-05 0.000294
GO:0044262 cellular carbohydrate metabolic process 13.56% (8/59) 2.54 6.4e-05 0.000295
GO:0008891 glycolate oxidase activity 3.39% (2/59) 7.29 6.7e-05 0.000305
GO:0003973 (S)-2-hydroxy-acid oxidase activity 3.39% (2/59) 7.29 6.7e-05 0.000305
GO:1901361 organic cyclic compound catabolic process 11.86% (7/59) 2.78 6.8e-05 0.00031
GO:0034645 cellular macromolecule biosynthetic process 18.64% (11/59) 2.01 7.2e-05 0.000326
GO:0010114 response to red light 6.78% (4/59) 4.17 7.3e-05 0.000329
GO:0005976 polysaccharide metabolic process 13.56% (8/59) 2.51 7.4e-05 0.00033
GO:0044424 intracellular part 91.53% (54/59) 0.38 7.6e-05 0.000336
GO:0051707 response to other organism 18.64% (11/59) 2.0 7.8e-05 0.000344
GO:0016120 carotene biosynthetic process 3.39% (2/59) 7.07 9.3e-05 0.000409
GO:1901566 organonitrogen compound biosynthetic process 20.34% (12/59) 1.84 9.7e-05 0.000424
GO:0016556 mRNA modification 6.78% (4/59) 4.03 0.000108 0.000469
GO:0006790 sulfur compound metabolic process 13.56% (8/59) 2.41 0.000121 0.00052
GO:0051704 multi-organism process 18.64% (11/59) 1.93 0.000122 0.00052
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 8.47% (5/59) 3.36 0.000127 0.000541
GO:0046490 isopentenyl diphosphate metabolic process 8.47% (5/59) 3.34 0.000138 0.00058
GO:0009240 isopentenyl diphosphate biosynthetic process 8.47% (5/59) 3.34 0.000138 0.00058
GO:0043207 response to external biotic stimulus 18.64% (11/59) 1.9 0.000143 0.000597
GO:0009607 response to biotic stimulus 18.64% (11/59) 1.9 0.000144 0.000598
GO:0098542 defense response to other organism 15.25% (9/59) 2.18 0.000152 0.000628
GO:0009637 response to blue light 6.78% (4/59) 3.87 0.000164 0.000673
GO:0009773 photosynthetic electron transport in photosystem I 5.08% (3/59) 4.81 0.000168 0.000689
GO:0030091 protein repair 3.39% (2/59) 6.55 0.000199 0.000806
GO:0010206 photosystem II repair 3.39% (2/59) 6.55 0.000199 0.000806
GO:0016114 terpenoid biosynthetic process 8.47% (5/59) 3.18 0.000226 0.000904
GO:0009059 macromolecule biosynthetic process 18.64% (11/59) 1.82 0.000225 0.000905
GO:0016119 carotene metabolic process 3.39% (2/59) 6.29 0.000291 0.001161
GO:0017144 drug metabolic process 13.56% (8/59) 2.21 0.000305 0.001207
GO:0019748 secondary metabolic process 11.86% (7/59) 2.41 0.000329 0.001296
GO:0006721 terpenoid metabolic process 8.47% (5/59) 3.05 0.000345 0.00134
GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor 3.39% (2/59) 6.17 0.000344 0.001341
GO:0046246 terpene biosynthetic process 3.39% (2/59) 6.17 0.000344 0.001341
GO:0016051 carbohydrate biosynthetic process 13.56% (8/59) 2.18 0.000362 0.001396
GO:0009767 photosynthetic electron transport chain 5.08% (3/59) 4.44 0.000367 0.001409
GO:0006952 defense response 16.95% (10/59) 1.86 0.000374 0.00143
GO:0010287 plastoglobule 5.08% (3/59) 4.37 0.000419 0.001592
GO:0033559 unsaturated fatty acid metabolic process 5.08% (3/59) 4.33 0.000456 0.001717
GO:0006636 unsaturated fatty acid biosynthetic process 5.08% (3/59) 4.33 0.000456 0.001717
GO:0097659 nucleic acid-templated transcription 6.78% (4/59) 3.41 0.000549 0.002036
GO:0006351 transcription, DNA-templated 6.78% (4/59) 3.41 0.000549 0.002036
GO:0006091 generation of precursor metabolites and energy 10.17% (6/59) 2.55 0.000548 0.002054
GO:0031969 chloroplast membrane 5.08% (3/59) 4.19 0.000603 0.002214
GO:0010155 regulation of proton transport 5.08% (3/59) 4.19 0.000603 0.002214
GO:1904062 regulation of cation transmembrane transport 5.08% (3/59) 4.15 0.00065 0.002375
GO:0006082 organic acid metabolic process 20.34% (12/59) 1.54 0.000666 0.002409
GO:0043436 oxoacid metabolic process 20.34% (12/59) 1.54 0.000663 0.00241
GO:0010310 regulation of hydrogen peroxide metabolic process 6.78% (4/59) 3.33 0.000676 0.002433
GO:0009965 leaf morphogenesis 6.78% (4/59) 3.32 0.000703 0.00252
GO:0015979 photosynthesis 6.78% (4/59) 3.31 0.000717 0.002558
GO:0042214 terpene metabolic process 3.39% (2/59) 5.62 0.000747 0.002653
GO:0019438 aromatic compound biosynthetic process 16.95% (10/59) 1.73 0.000756 0.002671
GO:1901575 organic substance catabolic process 16.95% (10/59) 1.73 0.000764 0.002688
GO:0042170 plastid membrane 5.08% (3/59) 4.03 0.000832 0.002913
GO:0000413 protein peptidyl-prolyl isomerization 3.39% (2/59) 5.48 0.000915 0.003189
GO:0044248 cellular catabolic process 16.95% (10/59) 1.69 0.000936 0.003246
GO:2000377 regulation of reactive oxygen species metabolic process 6.78% (4/59) 3.19 0.00097 0.003349
GO:0023014 signal transduction by protein phosphorylation 6.78% (4/59) 3.19 0.000988 0.003363
GO:0000165 MAPK cascade 6.78% (4/59) 3.19 0.000988 0.003363
GO:0022900 electron transport chain 5.08% (3/59) 3.95 0.000981 0.003369
GO:0044464 cell part 93.22% (55/59) 0.27 0.001027 0.003464
GO:0051193 regulation of cofactor metabolic process 6.78% (4/59) 3.17 0.001024 0.00347
GO:0008610 lipid biosynthetic process 13.56% (8/59) 1.93 0.001102 0.003651
GO:0005528 FK506 binding 3.39% (2/59) 5.35 0.0011 0.003661
GO:0005527 macrolide binding 3.39% (2/59) 5.35 0.0011 0.003661
GO:0043412 macromolecule modification 20.34% (12/59) 1.46 0.001097 0.003686
GO:0044267 cellular protein metabolic process 20.34% (12/59) 1.44 0.001214 0.004006
GO:0008654 phospholipid biosynthetic process 8.47% (5/59) 2.61 0.001377 0.004523
GO:0016999 antibiotic metabolic process 8.47% (5/59) 2.6 0.001409 0.004608
GO:0019222 regulation of metabolic process 23.73% (14/59) 1.26 0.001503 0.004896
GO:0009707 chloroplast outer membrane 3.39% (2/59) 5.07 0.001632 0.005269
GO:0008047 enzyme activator activity 3.39% (2/59) 5.07 0.001632 0.005269
GO:0031323 regulation of cellular metabolic process 22.03% (13/59) 1.32 0.00164 0.005273
GO:0019538 protein metabolic process 23.73% (14/59) 1.24 0.001727 0.005529
GO:0006644 phospholipid metabolic process 8.47% (5/59) 2.52 0.001776 0.00566
GO:0006090 pyruvate metabolic process 8.47% (5/59) 2.5 0.001913 0.00607
GO:0030163 protein catabolic process 6.78% (4/59) 2.92 0.001923 0.006078
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 6.78% (4/59) 2.9 0.002039 0.006416
GO:0034762 regulation of transmembrane transport 5.08% (3/59) 3.57 0.002069 0.006456
GO:0034765 regulation of ion transmembrane transport 5.08% (3/59) 3.57 0.002069 0.006456
GO:0031361 integral component of thylakoid membrane 1.69% (1/59) 8.87 0.002133 0.006469
GO:0035970 peptidyl-threonine dephosphorylation 1.69% (1/59) 8.87 0.002133 0.006469
GO:0031360 intrinsic component of thylakoid membrane 1.69% (1/59) 8.87 0.002133 0.006469
GO:0009661 chromoplast organization 1.69% (1/59) 8.87 0.002133 0.006469
GO:0030504 inorganic diphosphate transmembrane transporter activity 1.69% (1/59) 8.87 0.002133 0.006469
GO:0016719 carotene 7,8-desaturase activity 1.69% (1/59) 8.87 0.002133 0.006469
GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity 1.69% (1/59) 8.87 0.002133 0.006469
GO:0009527 plastid outer membrane 3.39% (2/59) 4.83 0.002264 0.006838
GO:1901362 organic cyclic compound biosynthetic process 16.95% (10/59) 1.51 0.002394 0.007201
GO:0018208 peptidyl-proline modification 3.39% (2/59) 4.7 0.002691 0.008061
GO:0051254 positive regulation of RNA metabolic process 8.47% (5/59) 2.37 0.002767 0.008159
GO:1902680 positive regulation of RNA biosynthetic process 8.47% (5/59) 2.37 0.002767 0.008159
GO:0045893 positive regulation of transcription, DNA-templated 8.47% (5/59) 2.37 0.002767 0.008159
GO:1903508 positive regulation of nucleic acid-templated transcription 8.47% (5/59) 2.37 0.002767 0.008159
GO:1901137 carbohydrate derivative biosynthetic process 10.17% (6/59) 2.09 0.002825 0.008299
GO:0031348 negative regulation of defense response 6.78% (4/59) 2.76 0.002909 0.008479
GO:0009056 catabolic process 16.95% (10/59) 1.47 0.002898 0.008479
GO:0006109 regulation of carbohydrate metabolic process 3.39% (2/59) 4.62 0.002994 0.008692
GO:0009605 response to external stimulus 18.64% (11/59) 1.37 0.003036 0.008781
GO:0006468 protein phosphorylation 10.17% (6/59) 2.06 0.003065 0.008794
GO:0044255 cellular lipid metabolic process 13.56% (8/59) 1.7 0.003056 0.008803
GO:0018130 heterocycle biosynthetic process 13.56% (8/59) 1.69 0.003105 0.008842
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 8.47% (5/59) 2.33 0.003124 0.008863
GO:0009867 jasmonic acid mediated signaling pathway 6.78% (4/59) 2.73 0.003102 0.008868
GO:0090407 organophosphate biosynthetic process 11.86% (7/59) 1.85 0.003163 0.008939
GO:0017000 antibiotic biosynthetic process 6.78% (4/59) 2.72 0.003181 0.008958
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 5.08% (3/59) 3.33 0.003356 0.009413
GO:0010628 positive regulation of gene expression 8.47% (5/59) 2.3 0.003421 0.009525
GO:0006979 response to oxidative stress 8.47% (5/59) 2.3 0.003421 0.009525
GO:0010557 positive regulation of macromolecule biosynthetic process 8.47% (5/59) 2.29 0.003514 0.009747
GO:0031328 positive regulation of cellular biosynthetic process 8.47% (5/59) 2.27 0.003737 0.010329
GO:0032774 RNA biosynthetic process 6.78% (4/59) 2.63 0.003959 0.010902
GO:0006633 fatty acid biosynthetic process 5.08% (3/59) 3.24 0.003996 0.010924
GO:0042743 hydrogen peroxide metabolic process 5.08% (3/59) 3.24 0.003996 0.010924
GO:0051173 positive regulation of nitrogen compound metabolic process 8.47% (5/59) 2.24 0.004074 0.011057
GO:0043269 regulation of ion transport 5.08% (3/59) 3.23 0.004072 0.011089
GO:0080079 cellobiose glucosidase activity 1.69% (1/59) 7.87 0.004262 0.011281
GO:0046320 regulation of fatty acid oxidation 1.69% (1/59) 7.87 0.004262 0.011281
GO:0080093 regulation of photorespiration 1.69% (1/59) 7.87 0.004262 0.011281
GO:0031998 regulation of fatty acid beta-oxidation 1.69% (1/59) 7.87 0.004262 0.011281
GO:0009977 proton motive force dependent protein transmembrane transporter activity 1.69% (1/59) 7.87 0.004262 0.011281
GO:0004328 formamidase activity 1.69% (1/59) 7.87 0.004262 0.011281
GO:1905392 plant organ morphogenesis 6.78% (4/59) 2.61 0.004196 0.011346
GO:0010604 positive regulation of macromolecule metabolic process 8.47% (5/59) 2.22 0.004323 0.0114
GO:0080090 regulation of primary metabolic process 20.34% (12/59) 1.22 0.004436 0.011657
GO:0031325 positive regulation of cellular metabolic process 8.47% (5/59) 2.2 0.004582 0.012
GO:0009853 photorespiration 5.08% (3/59) 3.14 0.00479 0.0125
GO:0031968 organelle outer membrane 3.39% (2/59) 4.23 0.005132 0.013256
GO:0019867 outer membrane 3.39% (2/59) 4.23 0.005132 0.013256
GO:0009451 RNA modification 6.78% (4/59) 2.53 0.005129 0.013338
GO:0072330 monocarboxylic acid biosynthetic process 10.17% (6/59) 1.9 0.005221 0.013438
GO:0048046 apoplast 6.78% (4/59) 2.52 0.005297 0.013586
GO:0005975 carbohydrate metabolic process 13.56% (8/59) 1.56 0.005454 0.013942
GO:0016491 oxidoreductase activity 11.86% (7/59) 1.69 0.005692 0.014502
GO:0031347 regulation of defense response 8.47% (5/59) 2.11 0.006001 0.015236
GO:0072593 reactive oxygen species metabolic process 5.08% (3/59) 3.01 0.006147 0.015503
GO:0005777 peroxisome 5.08% (3/59) 3.01 0.006147 0.015503
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.39% (2/59) 4.09 0.006179 0.015531
GO:0050896 response to stimulus 35.59% (21/59) 0.77 0.006258 0.015625
GO:0051049 regulation of transport 5.08% (3/59) 3.01 0.006245 0.015644
GO:0043235 receptor complex 1.69% (1/59) 7.29 0.006387 0.015736
GO:0080183 response to photooxidative stress 1.69% (1/59) 7.29 0.006387 0.015736
GO:0033281 TAT protein transport complex 1.69% (1/59) 7.29 0.006387 0.015736
GO:0016071 mRNA metabolic process 6.78% (4/59) 2.43 0.006446 0.01583
GO:0032787 monocarboxylic acid metabolic process 13.56% (8/59) 1.52 0.006369 0.015848
GO:0009863 salicylic acid mediated signaling pathway 6.78% (4/59) 2.43 0.006576 0.016096
GO:0043094 cellular metabolic compound salvage 5.08% (3/59) 2.96 0.006852 0.016717
GO:0065007 biological regulation 33.9% (20/59) 0.79 0.006972 0.016953
GO:0016859 cis-trans isomerase activity 3.39% (2/59) 3.99 0.007081 0.017109
GO:0043086 negative regulation of catalytic activity 3.39% (2/59) 3.99 0.007081 0.017109
GO:0050789 regulation of biological process 30.51% (18/59) 0.85 0.007143 0.017204
GO:0042579 microbody 5.08% (3/59) 2.93 0.007168 0.017208
GO:0080134 regulation of response to stress 8.47% (5/59) 2.04 0.007383 0.017667
GO:0048585 negative regulation of response to stimulus 6.78% (4/59) 2.35 0.007824 0.018663
GO:0051171 regulation of nitrogen compound metabolic process 18.64% (11/59) 1.18 0.007876 0.018728
GO:0006629 lipid metabolic process 13.56% (8/59) 1.46 0.007989 0.018936
GO:0006612 protein targeting to membrane 6.78% (4/59) 2.34 0.008046 0.018952
GO:0006655 phosphatidylglycerol biosynthetic process 3.39% (2/59) 3.9 0.008039 0.018993
GO:0010363 regulation of plant-type hypersensitive response 6.78% (4/59) 2.34 0.008121 0.019068
GO:0046471 phosphatidylglycerol metabolic process 3.39% (2/59) 3.87 0.008287 0.019216
GO:0072657 protein localization to membrane 6.78% (4/59) 2.33 0.008273 0.019243
GO:0090150 establishment of protein localization to membrane 6.78% (4/59) 2.33 0.008273 0.019243
GO:0009891 positive regulation of biosynthetic process 8.47% (5/59) 2.0 0.008265 0.019346
GO:0033517 myo-inositol hexakisphosphate metabolic process 3.39% (2/59) 3.85 0.008538 0.019497
GO:0010264 myo-inositol hexakisphosphate biosynthetic process 3.39% (2/59) 3.85 0.008538 0.019497
GO:0032958 inositol phosphate biosynthetic process 3.39% (2/59) 3.85 0.008538 0.019497
GO:0044283 small molecule biosynthetic process 13.56% (8/59) 1.45 0.008439 0.019508
GO:0034613 cellular protein localization 10.17% (6/59) 1.76 0.008521 0.019638
GO:0080135 regulation of cellular response to stress 6.78% (4/59) 2.28 0.009219 0.020989
GO:0046173 polyol biosynthetic process 3.39% (2/59) 3.79 0.009313 0.021137
GO:0009639 response to red or far red light 6.78% (4/59) 2.28 0.009384 0.021234
GO:0044092 negative regulation of molecular function 3.39% (2/59) 3.76 0.009578 0.021607
GO:0044271 cellular nitrogen compound biosynthetic process 13.56% (8/59) 1.41 0.009706 0.021832
GO:0043067 regulation of programmed cell death 6.78% (4/59) 2.24 0.010147 0.022755
GO:0070727 cellular macromolecule localization 10.17% (6/59) 1.69 0.010365 0.023174
GO:0009893 positive regulation of metabolic process 8.47% (5/59) 1.91 0.010515 0.02344
GO:0032879 regulation of localization 5.08% (3/59) 2.72 0.010671 0.023716
GO:0010941 regulation of cell death 6.78% (4/59) 2.21 0.010859 0.024063
GO:0016310 phosphorylation 10.17% (6/59) 1.68 0.010981 0.024262
GO:0060255 regulation of macromolecule metabolic process 18.64% (11/59) 1.1 0.01166 0.025686
GO:0050665 hydrogen peroxide biosynthetic process 3.39% (2/59) 3.61 0.011816 0.025878
GO:0009416 response to light stimulus 11.86% (7/59) 1.49 0.011804 0.025927
GO:0006886 intracellular protein transport 10.17% (6/59) 1.64 0.012229 0.026705
GO:0045088 regulation of innate immune response 6.78% (4/59) 2.16 0.012279 0.026734
GO:0050776 regulation of immune response 6.78% (4/59) 2.15 0.012476 0.027087
GO:0016849 phosphorus-oxygen lyase activity 1.69% (1/59) 6.29 0.012734 0.027486
GO:0050994 regulation of lipid catabolic process 1.69% (1/59) 6.29 0.012734 0.027486
GO:0002682 regulation of immune system process 6.78% (4/59) 2.14 0.012777 0.0275
GO:1903409 reactive oxygen species biosynthetic process 3.39% (2/59) 3.52 0.01332 0.028587
GO:0009072 aromatic amino acid family metabolic process 5.08% (3/59) 2.55 0.014685 0.031426
GO:0016050 vesicle organization 1.69% (1/59) 6.07 0.01484 0.031668
GO:0045184 establishment of protein localization 10.17% (6/59) 1.58 0.015022 0.031874
GO:0015031 protein transport 10.17% (6/59) 1.58 0.015022 0.031874
GO:0043647 inositol phosphate metabolic process 3.39% (2/59) 3.41 0.015229 0.032223
GO:0008104 protein localization 10.17% (6/59) 1.56 0.015822 0.033382
GO:0009314 response to radiation 11.86% (7/59) 1.4 0.016154 0.033988
GO:0009533 chloroplast stromal thylakoid 1.69% (1/59) 5.87 0.016943 0.035447
GO:0010190 cytochrome b6f complex assembly 1.69% (1/59) 5.87 0.016943 0.035447
GO:0009069 serine family amino acid metabolic process 5.08% (3/59) 2.46 0.017237 0.035963
GO:0051234 establishment of localization 20.34% (12/59) 0.96 0.017868 0.037072
GO:0035556 intracellular signal transduction 6.78% (4/59) 2.0 0.017854 0.037146
GO:0048583 regulation of response to stimulus 8.47% (5/59) 1.68 0.019819 0.041007
GO:0006950 response to stress 23.73% (14/59) 0.84 0.020201 0.041682
GO:0009595 detection of biotic stimulus 3.39% (2/59) 3.17 0.020851 0.042905
GO:0033036 macromolecule localization 10.17% (6/59) 1.47 0.02098 0.043052
GO:0019217 regulation of fatty acid metabolic process 1.69% (1/59) 5.55 0.021134 0.04325
GO:0006605 protein targeting 8.47% (5/59) 1.65 0.021202 0.043271
GO:0046907 intracellular transport 10.17% (6/59) 1.45 0.022079 0.044937
GO:0044265 cellular macromolecule catabolic process 6.78% (4/59) 1.9 0.022278 0.045221
GO:0008565 protein transporter activity 3.39% (2/59) 3.08 0.023543 0.047658
GO:0048522 positive regulation of cellular process 8.47% (5/59) 1.61 0.023685 0.047816
GO:0019751 polyol metabolic process 3.39% (2/59) 3.07 0.023938 0.048198
GO:0015833 peptide transport 10.17% (6/59) 1.42 0.024293 0.048781
GO:0036211 protein modification process 13.56% (8/59) 1.17 0.024905 0.049744
GO:0006464 cellular protein modification process 13.56% (8/59) 1.17 0.024905 0.049744
GO:0042886 amide transport 10.17% (6/59) 1.41 0.025097 0.049994
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_29 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_102 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_156 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_243 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_261 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_56 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_59 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_261 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_20 0.034 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_75 0.032 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_98 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_182 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.063 Archaeplastida Compare
Gingko biloba HCCA Cluster_145 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.053 Archaeplastida Compare
Zea mays HCCA Cluster_2 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_99 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.061 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.076 Archaeplastida Compare
Zea mays HCCA Cluster_212 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.132 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.058 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.037 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_83 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_123 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_175 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_177 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.059 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_120 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.049 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_278 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_27 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_65 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.043 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_292 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.078 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.08 Archaeplastida Compare
Oryza sativa HCCA Cluster_248 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.046 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.065 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.041 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_103 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.039 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_186 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.104 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_73 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_147 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_153 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_186 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.058 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_271 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_77 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.061 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.059 Archaeplastida Compare
Vitis vinifera HCCA Cluster_115 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_118 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_124 0.051 Archaeplastida Compare
Vitis vinifera HCCA Cluster_158 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.099 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.044 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_78 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_119 0.041 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.031 Archaeplastida Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms