Coexpression cluster: Cluster_69 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006260 DNA replication 7.14% (5/70) 5.91 0.0 3e-06
GO:0006259 DNA metabolic process 10.0% (7/70) 4.13 0.0 1.3e-05
GO:0044427 chromosomal part 7.14% (5/70) 4.79 1e-06 5.6e-05
GO:0005488 binding 41.43% (29/70) 1.17 7e-06 0.000227
GO:0003677 DNA binding 11.43% (8/70) 3.03 6e-06 0.000248
GO:0031262 Ndc80 complex 2.86% (2/70) 8.12 1.3e-05 0.000274
GO:0000166 nucleotide binding 20.0% (14/70) 1.95 1.2e-05 0.000292
GO:1901265 nucleoside phosphate binding 20.0% (14/70) 1.95 1.2e-05 0.000292
GO:0036094 small molecule binding 20.0% (14/70) 1.88 2e-05 0.000386
GO:1901363 heterocyclic compound binding 27.14% (19/70) 1.4 5.7e-05 0.00088
GO:0097159 organic cyclic compound binding 27.14% (19/70) 1.4 5.7e-05 0.00088
GO:0005524 ATP binding 15.71% (11/70) 2.04 6.4e-05 0.000916
GO:0030554 adenyl nucleotide binding 15.71% (11/70) 1.96 0.000105 0.001283
GO:0032559 adenyl ribonucleotide binding 15.71% (11/70) 1.97 0.000103 0.001351
GO:0003887 DNA-directed DNA polymerase activity 2.86% (2/70) 6.79 0.000127 0.001359
GO:0008144 drug binding 15.71% (11/70) 1.94 0.000123 0.0014
GO:0044260 cellular macromolecule metabolic process 17.14% (12/70) 1.77 0.000169 0.0017
GO:1903047 mitotic cell cycle process 2.86% (2/70) 6.53 0.00019 0.001808
GO:0035639 purine ribonucleoside triphosphate binding 15.71% (11/70) 1.82 0.000246 0.00221
GO:0043168 anion binding 17.14% (12/70) 1.7 0.000266 0.002275
GO:0017076 purine nucleotide binding 15.71% (11/70) 1.75 0.000376 0.002676
GO:0032553 ribonucleotide binding 15.71% (11/70) 1.74 0.000393 0.002691
GO:0140097 catalytic activity, acting on DNA 4.29% (3/70) 4.42 0.000373 0.002776
GO:0032555 purine ribonucleotide binding 15.71% (11/70) 1.76 0.000362 0.002812
GO:0034061 DNA polymerase activity 2.86% (2/70) 6.12 0.000354 0.002879
GO:0097367 carbohydrate derivative binding 15.71% (11/70) 1.72 0.00046 0.002912
GO:0090304 nucleic acid metabolic process 10.0% (7/70) 2.35 0.000446 0.002931
GO:0022402 cell cycle process 2.86% (2/70) 5.66 0.00069 0.004212
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.43% (8/70) 2.02 0.000775 0.004419
GO:0044424 intracellular part 12.86% (9/70) 1.87 0.000755 0.00445
GO:0006281 DNA repair 4.29% (3/70) 3.82 0.001262 0.006742
GO:0003676 nucleic acid binding 12.86% (9/70) 1.77 0.001227 0.006771
GO:0033554 cellular response to stress 4.29% (3/70) 3.7 0.001596 0.006999
GO:0006974 cellular response to DNA damage stimulus 4.29% (3/70) 3.7 0.001596 0.006999
GO:0051716 cellular response to stimulus 4.29% (3/70) 3.7 0.001596 0.006999
GO:0044422 organelle part 7.14% (5/70) 2.57 0.001529 0.007263
GO:0044446 intracellular organelle part 7.14% (5/70) 2.57 0.001529 0.007263
GO:0044464 cell part 12.86% (9/70) 1.74 0.001426 0.007388
GO:0006139 nucleobase-containing compound metabolic process 10.0% (7/70) 2.04 0.001516 0.007622
GO:0034645 cellular macromolecule biosynthetic process 7.14% (5/70) 2.44 0.002268 0.009457
GO:0043170 macromolecule metabolic process 17.14% (12/70) 1.35 0.002265 0.009684
GO:0051276 chromosome organization 2.86% (2/70) 4.66 0.002823 0.010973
GO:0006725 cellular aromatic compound metabolic process 10.0% (7/70) 1.88 0.002823 0.011226
GO:0046483 heterocycle metabolic process 10.0% (7/70) 1.89 0.002764 0.011253
GO:0005089 Rho guanyl-nucleotide exchange factor activity 1.43% (1/70) 8.12 0.003604 0.011853
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 1.43% (1/70) 8.12 0.003604 0.011853
GO:0005088 Ras guanyl-nucleotide exchange factor activity 1.43% (1/70) 8.12 0.003604 0.011853
GO:0008608 attachment of spindle microtubules to kinetochore 1.43% (1/70) 8.12 0.003604 0.011853
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity 1.43% (1/70) 8.12 0.003604 0.011853
GO:1901360 organic cyclic compound metabolic process 10.0% (7/70) 1.84 0.003298 0.012259
GO:0009059 macromolecule biosynthetic process 7.14% (5/70) 2.3 0.003442 0.012523
GO:0004672 protein kinase activity 8.57% (6/70) 2.05 0.003296 0.012526
GO:0044815 DNA packaging complex 2.86% (2/70) 4.26 0.004882 0.014647
GO:0032993 protein-DNA complex 2.86% (2/70) 4.26 0.004882 0.014647
GO:0000786 nucleosome 2.86% (2/70) 4.31 0.004556 0.014701
GO:0043167 ion binding 18.57% (13/70) 1.15 0.004787 0.014882
GO:0005634 nucleus 4.29% (3/70) 3.15 0.004755 0.015058
GO:0016773 phosphotransferase activity, alcohol group as acceptor 8.57% (6/70) 1.91 0.005217 0.015381
GO:0016301 kinase activity 8.57% (6/70) 1.88 0.005683 0.016197
GO:0006807 nitrogen compound metabolic process 17.14% (12/70) 1.19 0.005593 0.016209
GO:0009987 cellular process 20.0% (14/70) 1.05 0.006301 0.017664
GO:0031390 Ctf18 RFC-like complex 1.43% (1/70) 7.12 0.007196 0.019227
GO:0017048 Rho GTPase binding 1.43% (1/70) 7.12 0.007196 0.019227
GO:0000776 kinetochore 1.43% (1/70) 7.12 0.007196 0.019227
GO:0043231 intracellular membrane-bounded organelle 4.29% (3/70) 2.78 0.009536 0.024337
GO:0043227 membrane-bounded organelle 4.29% (3/70) 2.78 0.009536 0.024337
GO:0032991 protein-containing complex 8.57% (6/70) 1.73 0.009404 0.024739
GO:0007062 sister chromatid cohesion 1.43% (1/70) 6.53 0.010775 0.02595
GO:0007064 mitotic sister chromatid cohesion 1.43% (1/70) 6.53 0.010775 0.02595
GO:0006275 regulation of DNA replication 1.43% (1/70) 6.53 0.010775 0.02595
GO:0006996 organelle organization 2.86% (2/70) 3.66 0.010988 0.026096
GO:0044238 primary metabolic process 18.57% (13/70) 1.0 0.011356 0.026601
GO:0044237 cellular metabolic process 17.14% (12/70) 1.07 0.010622 0.026711
GO:0034641 cellular nitrogen compound metabolic process 10.0% (7/70) 1.49 0.01216 0.027361
GO:0003674 molecular_function 45.71% (32/70) 0.51 0.012094 0.027573
GO:0006468 protein phosphorylation 7.14% (5/70) 1.86 0.012092 0.027942
GO:0060249 anatomical structure homeostasis 1.43% (1/70) 6.12 0.014341 0.029906
GO:0005085 guanyl-nucleotide exchange factor activity 1.43% (1/70) 6.12 0.014341 0.029906
GO:0032200 telomere organization 1.43% (1/70) 6.12 0.014341 0.029906
GO:0051052 regulation of DNA metabolic process 1.43% (1/70) 6.12 0.014341 0.029906
GO:0000723 telomere maintenance 1.43% (1/70) 6.12 0.014341 0.029906
GO:0005515 protein binding 14.29% (10/70) 1.15 0.013743 0.03052
GO:0016310 phosphorylation 7.14% (5/70) 1.77 0.015841 0.032636
GO:0071704 organic substance metabolic process 18.57% (13/70) 0.93 0.016772 0.034144
GO:0016042 lipid catabolic process 1.43% (1/70) 5.53 0.021435 0.043122
GO:0065007 biological regulation 5.71% (4/70) 1.89 0.022832 0.045398
GO:2000112 regulation of cellular macromolecule biosynthetic process 4.29% (3/70) 2.24 0.025722 0.046793
GO:0010556 regulation of macromolecule biosynthetic process 4.29% (3/70) 2.24 0.025722 0.046793
GO:0009889 regulation of biosynthetic process 4.29% (3/70) 2.24 0.025722 0.046793
GO:0031326 regulation of cellular biosynthetic process 4.29% (3/70) 2.24 0.025722 0.046793
GO:0019219 regulation of nucleobase-containing compound metabolic process 4.29% (3/70) 2.24 0.025722 0.046793
GO:0043226 organelle 5.71% (4/70) 1.87 0.024084 0.046799
GO:0043229 intracellular organelle 5.71% (4/70) 1.87 0.02383 0.046838
GO:0006310 DNA recombination 1.43% (1/70) 5.31 0.024963 0.047963
GO:0016779 nucleotidyltransferase activity 2.86% (2/70) 2.97 0.027123 0.048821
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_49 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.101 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.086 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.039 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.063 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.07 Archaeplastida Compare
Gingko biloba HCCA Cluster_54 0.045 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.101 Archaeplastida Compare
Gingko biloba HCCA Cluster_295 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.1 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.062 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.054 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.046 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_6 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_49 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_184 0.059 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_218 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.052 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.044 Archaeplastida Compare
Picea abies HCCA Cluster_202 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_335 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.037 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.067 Archaeplastida Compare
Picea abies HCCA Cluster_401 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.07 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.058 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.044 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_29 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.046 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.088 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.061 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_262 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_281 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.118 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.042 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.056 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.057 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_110 0.026 Archaeplastida Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms