Coexpression cluster: Cluster_116 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 20.75% (22/106) 2.46 0.0 0.0
GO:0005488 binding 43.4% (46/106) 1.23 0.0 0.0
GO:0097159 organic cyclic compound binding 29.25% (31/106) 1.51 0.0 4e-06
GO:1901363 heterocyclic compound binding 29.25% (31/106) 1.51 0.0 4e-06
GO:0003674 molecular_function 53.77% (57/106) 0.74 3e-06 0.000237
GO:0033554 cellular response to stress 4.72% (5/106) 3.84 2.6e-05 0.001043
GO:0006974 cellular response to DNA damage stimulus 4.72% (5/106) 3.84 2.6e-05 0.001043
GO:0051716 cellular response to stimulus 4.72% (5/106) 3.84 2.6e-05 0.001043
GO:0006281 DNA repair 4.72% (5/106) 3.96 1.7e-05 0.00105
GO:0006259 DNA metabolic process 5.66% (6/106) 3.31 3.3e-05 0.001178
GO:0006139 nucleobase-containing compound metabolic process 10.38% (11/106) 2.1 5.3e-05 0.001371
GO:0090304 nucleic acid metabolic process 9.43% (10/106) 2.26 4.6e-05 0.001381
GO:0003678 DNA helicase activity 2.83% (3/106) 5.4 4.3e-05 0.001425
GO:0140097 catalytic activity, acting on DNA 3.77% (4/106) 4.23 6e-05 0.001433
GO:0044428 nuclear part 4.72% (5/106) 3.63 5.3e-05 0.001461
GO:0015631 tubulin binding 3.77% (4/106) 4.16 7.3e-05 0.00164
GO:0043138 3'-5' DNA helicase activity 1.89% (2/106) 6.93 8.8e-05 0.001873
GO:0008144 drug binding 13.21% (14/106) 1.69 0.000109 0.00219
GO:0003677 DNA binding 7.55% (8/106) 2.44 0.00012 0.002282
GO:0006725 cellular aromatic compound metabolic process 10.38% (11/106) 1.94 0.000141 0.002321
GO:0046483 heterocycle metabolic process 10.38% (11/106) 1.94 0.000137 0.002352
GO:0008092 cytoskeletal protein binding 3.77% (4/106) 3.93 0.000136 0.002448
GO:1901360 organic cyclic compound metabolic process 10.38% (11/106) 1.9 0.000181 0.002609
GO:0010639 negative regulation of organelle organization 1.89% (2/106) 6.52 0.000176 0.002644
GO:0051129 negative regulation of cellular component organization 1.89% (2/106) 6.52 0.000176 0.002644
GO:0005524 ATP binding 12.26% (13/106) 1.68 0.000198 0.00275
GO:0043170 macromolecule metabolic process 16.98% (18/106) 1.34 0.000234 0.003123
GO:0006260 DNA replication 2.83% (3/106) 4.58 0.000258 0.003333
GO:0043015 gamma-tubulin binding 1.89% (2/106) 6.2 0.000292 0.0034
GO:0044422 organelle part 6.6% (7/106) 2.46 0.000291 0.003503
GO:0044446 intracellular organelle part 6.6% (7/106) 2.46 0.000291 0.003503
GO:0030554 adenyl nucleotide binding 12.26% (13/106) 1.6 0.000337 0.003582
GO:0006807 nitrogen compound metabolic process 17.92% (19/106) 1.25 0.000319 0.003594
GO:0032559 adenyl ribonucleotide binding 12.26% (13/106) 1.61 0.000329 0.003601
GO:0034641 cellular nitrogen compound metabolic process 11.32% (12/106) 1.67 0.000392 0.004048
GO:0009987 cellular process 20.75% (22/106) 1.11 0.000425 0.004259
GO:0036094 small molecule binding 14.15% (15/106) 1.38 0.00061 0.005799
GO:0005643 nuclear pore 1.89% (2/106) 5.71 0.000609 0.005939
GO:0004386 helicase activity 2.83% (3/106) 4.06 0.000765 0.007085
GO:0017111 nucleoside-triphosphatase activity 6.6% (7/106) 2.21 0.000816 0.007361
GO:0035639 purine ribonucleoside triphosphate binding 12.26% (13/106) 1.46 0.00084 0.007395
GO:0016787 hydrolase activity 13.21% (14/106) 1.37 0.000962 0.008272
GO:0016462 pyrophosphatase activity 6.6% (7/106) 2.15 0.001023 0.008591
GO:0000166 nucleotide binding 13.21% (14/106) 1.35 0.001155 0.008684
GO:1901265 nucleoside phosphate binding 13.21% (14/106) 1.35 0.001155 0.008684
GO:0016817 hydrolase activity, acting on acid anhydrides 6.6% (7/106) 2.14 0.001087 0.008717
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.6% (7/106) 2.14 0.001065 0.008739
GO:0043167 ion binding 17.92% (19/106) 1.1 0.001143 0.008969
GO:0017076 purine nucleotide binding 12.26% (13/106) 1.39 0.00132 0.00934
GO:0032555 purine ribonucleotide binding 12.26% (13/106) 1.4 0.001268 0.009343
GO:0043168 anion binding 13.21% (14/106) 1.33 0.001316 0.009503
GO:0032553 ribonucleotide binding 12.26% (13/106) 1.38 0.001386 0.009624
GO:0033043 regulation of organelle organization 1.89% (2/106) 5.06 0.001572 0.010706
GO:0097367 carbohydrate derivative binding 12.26% (13/106) 1.36 0.001634 0.010728
GO:0044238 primary metabolic process 18.87% (20/106) 1.02 0.001623 0.010849
GO:0016485 protein processing 1.89% (2/106) 4.93 0.001879 0.012115
GO:0044237 cellular metabolic process 16.98% (18/106) 1.06 0.002251 0.014012
GO:0051128 regulation of cellular component organization 1.89% (2/106) 4.82 0.002213 0.014017
GO:0044260 cellular macromolecule metabolic process 12.26% (13/106) 1.29 0.002454 0.015012
GO:0048523 negative regulation of cellular process 1.89% (2/106) 4.71 0.002573 0.015226
GO:0051604 protein maturation 1.89% (2/106) 4.71 0.002573 0.015226
GO:0071704 organic substance metabolic process 18.87% (20/106) 0.95 0.002937 0.017102
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 0.94% (1/106) 7.52 0.005458 0.022911
GO:0033046 negative regulation of sister chromatid segregation 0.94% (1/106) 7.52 0.005458 0.022911
GO:0045839 negative regulation of mitotic nuclear division 0.94% (1/106) 7.52 0.005458 0.022911
GO:0006480 N-terminal protein amino acid methylation 0.94% (1/106) 7.52 0.005458 0.022911
GO:0051784 negative regulation of nuclear division 0.94% (1/106) 7.52 0.005458 0.022911
GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle 0.94% (1/106) 7.52 0.005458 0.022911
GO:0045930 negative regulation of mitotic cell cycle 0.94% (1/106) 7.52 0.005458 0.022911
GO:0033048 negative regulation of mitotic sister chromatid segregation 0.94% (1/106) 7.52 0.005458 0.022911
GO:0043625 delta DNA polymerase complex 0.94% (1/106) 7.52 0.005458 0.022911
GO:2000816 negative regulation of mitotic sister chromatid separation 0.94% (1/106) 7.52 0.005458 0.022911
GO:1901988 negative regulation of cell cycle phase transition 0.94% (1/106) 7.52 0.005458 0.022911
GO:0071174 mitotic spindle checkpoint 0.94% (1/106) 7.52 0.005458 0.022911
GO:0032039 integrator complex 0.94% (1/106) 7.52 0.005458 0.022911
GO:0042575 DNA polymerase complex 0.94% (1/106) 7.52 0.005458 0.022911
GO:0008193 tRNA guanylyltransferase activity 0.94% (1/106) 7.52 0.005458 0.022911
GO:0071173 spindle assembly checkpoint 0.94% (1/106) 7.52 0.005458 0.022911
GO:1901991 negative regulation of mitotic cell cycle phase transition 0.94% (1/106) 7.52 0.005458 0.022911
GO:0051985 negative regulation of chromosome segregation 0.94% (1/106) 7.52 0.005458 0.022911
GO:1905819 negative regulation of chromosome separation 0.94% (1/106) 7.52 0.005458 0.022911
GO:0007093 mitotic cell cycle checkpoint 0.94% (1/106) 7.52 0.005458 0.022911
GO:0007094 mitotic spindle assembly checkpoint 0.94% (1/106) 7.52 0.005458 0.022911
GO:0010948 negative regulation of cell cycle process 0.94% (1/106) 7.52 0.005458 0.022911
GO:0031577 spindle checkpoint 0.94% (1/106) 7.52 0.005458 0.022911
GO:0016973 poly(A)+ mRNA export from nucleus 0.94% (1/106) 7.52 0.005458 0.022911
GO:0032991 protein-containing complex 7.55% (8/106) 1.55 0.006236 0.025876
GO:0048519 negative regulation of biological process 1.89% (2/106) 3.87 0.008157 0.033462
GO:0051693 actin filament capping 0.94% (1/106) 6.52 0.010887 0.035728
GO:0051016 barbed-end actin filament capping 0.94% (1/106) 6.52 0.010887 0.035728
GO:0031333 negative regulation of protein complex assembly 0.94% (1/106) 6.52 0.010887 0.035728
GO:1901879 regulation of protein depolymerization 0.94% (1/106) 6.52 0.010887 0.035728
GO:1901880 negative regulation of protein depolymerization 0.94% (1/106) 6.52 0.010887 0.035728
GO:1902904 negative regulation of supramolecular fiber organization 0.94% (1/106) 6.52 0.010887 0.035728
GO:0030834 regulation of actin filament depolymerization 0.94% (1/106) 6.52 0.010887 0.035728
GO:0032272 negative regulation of protein polymerization 0.94% (1/106) 6.52 0.010887 0.035728
GO:0030835 negative regulation of actin filament depolymerization 0.94% (1/106) 6.52 0.010887 0.035728
GO:0030837 negative regulation of actin filament polymerization 0.94% (1/106) 6.52 0.010887 0.035728
GO:0051494 negative regulation of cytoskeleton organization 0.94% (1/106) 6.52 0.010887 0.035728
GO:0008290 F-actin capping protein complex 0.94% (1/106) 6.52 0.010887 0.035728
GO:0070568 guanylyltransferase activity 0.94% (1/106) 6.52 0.010887 0.035728
GO:0008192 RNA guanylyltransferase activity 0.94% (1/106) 6.52 0.010887 0.035728
GO:0051301 cell division 0.94% (1/106) 6.52 0.010887 0.035728
GO:2001251 negative regulation of chromosome organization 0.94% (1/106) 6.52 0.010887 0.035728
GO:0007059 chromosome segregation 0.94% (1/106) 6.52 0.010887 0.035728
GO:0031365 N-terminal protein amino acid modification 0.94% (1/106) 6.52 0.010887 0.035728
GO:0005849 mRNA cleavage factor complex 0.94% (1/106) 6.52 0.010887 0.035728
GO:0043242 negative regulation of protein complex disassembly 0.94% (1/106) 6.52 0.010887 0.035728
GO:0006378 mRNA polyadenylation 0.94% (1/106) 6.52 0.010887 0.035728
GO:0006471 protein ADP-ribosylation 0.94% (1/106) 6.52 0.010887 0.035728
GO:0044424 intracellular part 8.49% (9/106) 1.27 0.012532 0.040757
GO:0051236 establishment of RNA localization 0.94% (1/106) 5.93 0.016286 0.043549
GO:0050658 RNA transport 0.94% (1/106) 5.93 0.016286 0.043549
GO:0006405 RNA export from nucleus 0.94% (1/106) 5.93 0.016286 0.043549
GO:0051028 mRNA transport 0.94% (1/106) 5.93 0.016286 0.043549
GO:0051983 regulation of chromosome segregation 0.94% (1/106) 5.93 0.016286 0.043549
GO:1901987 regulation of cell cycle phase transition 0.94% (1/106) 5.93 0.016286 0.043549
GO:0051168 nuclear export 0.94% (1/106) 5.93 0.016286 0.043549
GO:0007088 regulation of mitotic nuclear division 0.94% (1/106) 5.93 0.016286 0.043549
GO:0010965 regulation of mitotic sister chromatid separation 0.94% (1/106) 5.93 0.016286 0.043549
GO:0030071 regulation of mitotic metaphase/anaphase transition 0.94% (1/106) 5.93 0.016286 0.043549
GO:0033045 regulation of sister chromatid segregation 0.94% (1/106) 5.93 0.016286 0.043549
GO:0033047 regulation of mitotic sister chromatid segregation 0.94% (1/106) 5.93 0.016286 0.043549
GO:0051783 regulation of nuclear division 0.94% (1/106) 5.93 0.016286 0.043549
GO:0043631 RNA polyadenylation 0.94% (1/106) 5.93 0.016286 0.043549
GO:0006406 mRNA export from nucleus 0.94% (1/106) 5.93 0.016286 0.043549
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 0.94% (1/106) 5.93 0.016286 0.043549
GO:0003910 DNA ligase (ATP) activity 0.94% (1/106) 5.93 0.016286 0.043549
GO:0005787 signal peptidase complex 0.94% (1/106) 5.93 0.016286 0.043549
GO:0043244 regulation of protein complex disassembly 0.94% (1/106) 5.93 0.016286 0.043549
GO:0006465 signal peptide processing 0.94% (1/106) 5.93 0.016286 0.043549
GO:1905818 regulation of chromosome separation 0.94% (1/106) 5.93 0.016286 0.043549
GO:0050657 nucleic acid transport 0.94% (1/106) 5.93 0.016286 0.043549
GO:1901990 regulation of mitotic cell cycle phase transition 0.94% (1/106) 5.93 0.016286 0.043549
GO:0008017 microtubule binding 1.89% (2/106) 3.43 0.014776 0.047625
GO:0006950 response to stress 4.72% (5/106) 1.71 0.018734 0.049729
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_58 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_265 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_95 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_220 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.033 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_155 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_54 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_173 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_262 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_3 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_6 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_222 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_254 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_401 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_434 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_470 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_473 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.048 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_242 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_29 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_35 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.043 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.041 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.057 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.037 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.019 Archaeplastida Compare
Sequences (106) (download table)

InterPro Domains

GO Terms

Family Terms