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  5. AT3G54890

AT3G54890 (LHCA1)


Aliases : LHCA1

Description : photosystem I light harvesting complex gene 1


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0003946 (LandPlants) Phylogenetic Tree(s): OG_05_0003946_tree ,
OG_06_0007187 (SeedPlants) Phylogenetic Tree(s): OG_06_0007187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54890
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00251360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.14 Archaeplastida
AMTR_s00009p00268360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.2 Archaeplastida
AMTR_s00010p00264770 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.17 Archaeplastida
AMTR_s00013p00180670 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.15 Archaeplastida
AMTR_s00022p00112770 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AMTR_s00029p00239610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.16 Archaeplastida
AMTR_s00045p00069220 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.1 Archaeplastida
AMTR_s00045p00069900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.15 Archaeplastida
AMTR_s00045p00070890 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AMTR_s00061p00059490 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.12 Archaeplastida
AMTR_s00088p00153020 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.15 Archaeplastida
AMTR_s00099p00139960 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.18 Archaeplastida
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.21 Archaeplastida
AMTR_s00153p00078810 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.11 Archaeplastida
AMTR_s00175p00040360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.18 Archaeplastida
AMTR_s00189p00032350 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.17 Archaeplastida
Cre01.g066917 No alias Photosynthesis.photophosphorylation.photosystem... 0.29 Archaeplastida
Cre03.g156900 No alias Photosynthesis.photophosphorylation.photosystem... 0.24 Archaeplastida
Cre04.g232104 No alias Photosynthesis.photophosphorylation.photosystem... 0.27 Archaeplastida
Cre06.g272650 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.31 Archaeplastida
Cre06.g278213 No alias Chlorophyll a-b binding protein P4, chloroplastic... 0.21 Archaeplastida
Cre06.g283050 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.28 Archaeplastida
Cre06.g283950 No alias Photosynthesis.photophosphorylation.photosystem... 0.28 Archaeplastida
Cre06.g284250 No alias Photosynthesis.photophosphorylation.photosystem... 0.19 Archaeplastida
Cre06.g285250 No alias Photosynthesis.photophosphorylation.photosystem... 0.27 Archaeplastida
Cre07.g344950 No alias Photosystem I chlorophyll a/b-binding protein 5,... 0.27 Archaeplastida
Cre10.g425900 No alias Chlorophyll a-b binding protein 4, chloroplastic... 0.24 Archaeplastida
Cre10.g452050 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.22 Archaeplastida
Cre11.g467573 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.27 Archaeplastida
Cre12.g508750 No alias Photosystem I chlorophyll a/b-binding protein 6,... 0.28 Archaeplastida
Cre12.g548400 No alias Photosynthesis.photophosphorylation.photosystem... 0.29 Archaeplastida
Cre12.g548950 No alias Photosynthesis.photophosphorylation.photosystem... 0.24 Archaeplastida
Cre16.g673650 No alias Photosynthesis.photophosphorylation.photosystem... 0.24 Archaeplastida
Cre16.g687900 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.28 Archaeplastida
Cre17.g720250 No alias Photosynthesis.photophosphorylation.photosystem... 0.21 Archaeplastida
GSVIVT01003201001 No alias Chlorophyll a-b binding protein 3, chloroplastic... 0.03 Archaeplastida
GSVIVT01007988001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.2 Archaeplastida
GSVIVT01009498001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 Archaeplastida
GSVIVT01010483001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.07 Archaeplastida
GSVIVT01013450001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
GSVIVT01014439001 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 Archaeplastida
GSVIVT01016295001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.14 Archaeplastida
GSVIVT01019377001 No alias Photosystem I chlorophyll a/b-binding protein 3-1,... 0.13 Archaeplastida
GSVIVT01020858001 No alias Chlorophyll a-b binding protein 40, chloroplastic... 0.11 Archaeplastida
GSVIVT01021405001 No alias Chlorophyll a-b binding protein 21, chloroplastic... 0.19 Archaeplastida
GSVIVT01021406001 No alias Chlorophyll a-b binding protein 2, chloroplastic... 0.14 Archaeplastida
GSVIVT01029789001 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 Archaeplastida
GSVIVT01030053001 No alias Chlorophyll a-b binding protein 151, chloroplastic... 0.22 Archaeplastida
GSVIVT01037111001 No alias Photosynthesis.photophosphorylation.photosystem... 0.08 Archaeplastida
Gb_00063 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Gb_10163 No alias component LHCa3 of LHC-I complex 0.1 Archaeplastida
Gb_13368 No alias component LHCb4 of LHC-II complex 0.03 Archaeplastida
Gb_18375 No alias component LHCa1 of LHC-I complex 0.17 Archaeplastida
Gb_25594 No alias Photosystem I chlorophyll a/b-binding protein 5,... 0.02 Archaeplastida
Gb_25595 No alias Photosystem I chlorophyll a/b-binding protein 5,... 0.04 Archaeplastida
Gb_27633 No alias component LHCb6 of LHC-II complex 0.08 Archaeplastida
Gb_30379 No alias Chlorophyll a-b binding protein CP26, chloroplastic... 0.11 Archaeplastida
Gb_32082 No alias component LHCa2 of LHC-I complex 0.13 Archaeplastida
Gb_38595 No alias component LHCb4 of LHC-II complex 0.13 Archaeplastida
LOC_Os01g41710.1 No alias component LHCb1/2/3 of LHC-II complex 0.21 Archaeplastida
LOC_Os02g10390.1 No alias component LHCa3 of LHC-I complex 0.14 Archaeplastida
LOC_Os03g39610.1 No alias component LHCb1/2/3 of LHC-II complex 0.23 Archaeplastida
LOC_Os04g38410.1 No alias component LHCb6 of LHC-II complex 0.21 Archaeplastida
LOC_Os06g21590.1 No alias component LHCa1 of LHC-I complex 0.18 Archaeplastida
LOC_Os07g37240.1 No alias component LHCb4 of LHC-II complex 0.21 Archaeplastida
LOC_Os07g37550.1 No alias component LHCb1/2/3 of LHC-II complex 0.2 Archaeplastida
LOC_Os07g38960.1 No alias component LHCa2 of LHC-I complex 0.18 Archaeplastida
LOC_Os08g33820.1 No alias component LHCa4 of LHC-I complex 0.14 Archaeplastida
LOC_Os09g12540.1 No alias component LHCq of LHC-II complex 0.05 Archaeplastida
LOC_Os09g17740.1 No alias component LHCb1/2/3 of LHC-II complex 0.16 Archaeplastida
LOC_Os11g13890.1 No alias component LHCb5 of LHC-II complex 0.23 Archaeplastida
MA_10431300g0010 No alias Chlorophyll a-b binding protein type I, chloroplastic... 0.13 Archaeplastida
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.08 Archaeplastida
MA_10431493g0010 No alias component LHCa1 of LHC-I complex 0.16 Archaeplastida
MA_129206g0010 No alias component LHCb4 of LHC-II complex 0.13 Archaeplastida
MA_131587g0010 No alias component LHCb1/2/3 of LHC-II complex 0.16 Archaeplastida
MA_176279g0010 No alias component LHCb5 of LHC-II complex 0.15 Archaeplastida
MA_18273g0010 No alias no hits & (original description: none) 0.14 Archaeplastida
MA_267089g0010 No alias Chlorophyll a-b binding protein type I, chloroplastic... 0.19 Archaeplastida
MA_65346g0010 No alias Chlorophyll a-b binding protein P4, chloroplastic... 0.16 Archaeplastida
MA_815900g0010 No alias component LHCa3 of LHC-I complex 0.15 Archaeplastida
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.09 Archaeplastida
Mp1g16850.1 No alias component LHCb4 of LHC-II complex 0.23 Archaeplastida
Mp1g29620.1 No alias component LHCb1/2/3 of LHC-II complex 0.14 Archaeplastida
Mp2g15420.1 No alias component LHCa1 of LHC-I complex 0.24 Archaeplastida
Mp3g07840.1 No alias component LHCa4 of LHC-I complex 0.24 Archaeplastida
Mp4g00930.1 No alias component LHCa3 of LHC-I complex 0.25 Archaeplastida
Mp4g10900.1 No alias component LHCb5 of LHC-II complex 0.23 Archaeplastida
Mp6g01650.1 No alias component LHCb6 of LHC-II complex 0.26 Archaeplastida
Mp7g05880.1 No alias component LHCb1/2/3 of LHC-II complex 0.33 Archaeplastida
Mp7g05890.1 No alias component LHCb1/2/3 of LHC-II complex 0.08 Archaeplastida
Mp7g06710.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06730.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Mp7g06740.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Mp7g06760.1 No alias component LHCb1/2/3 of LHC-II complex 0.21 Archaeplastida
Mp7g06770.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Mp7g06780.1 No alias component LHCb1/2/3 of LHC-II complex 0.14 Archaeplastida
Mp7g06790.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 Archaeplastida
Mp7g08940.1 No alias component LHCb1/2/3 of LHC-II complex 0.11 Archaeplastida
Mp7g09180.1 No alias component LHCb1/2/3 of LHC-II complex 0.09 Archaeplastida
Mp8g13180.1 No alias component LHCa2 of LHC-I complex 0.24 Archaeplastida
Pp3c10_25360V3.1 No alias photosystem I light harvesting complex gene 2 0.33 Archaeplastida
Pp3c10_25415V3.1 No alias photosystem I light harvesting complex gene 2 0.3 Archaeplastida
Pp3c10_25450V3.1 No alias photosystem I light harvesting complex gene 2 0.23 Archaeplastida
Pp3c10_3020V3.1 No alias photosystem II light harvesting complex gene 2.3 0.12 Archaeplastida
Pp3c12_19200V3.1 No alias photosystem I light harvesting complex gene 2 0.08 Archaeplastida
Pp3c12_25430V3.1 No alias light harvesting complex photosystem II 0.22 Archaeplastida
Pp3c12_25460V3.1 No alias light harvesting complex photosystem II 0.3 Archaeplastida
Pp3c13_14980V3.1 No alias photosystem I light harvesting complex gene 1 0.3 Archaeplastida
Pp3c13_5930V3.1 No alias photosystem II light harvesting complex gene 2.1 0.23 Archaeplastida
Pp3c13_7900V3.1 No alias photosystem II light harvesting complex gene 2.1 0.23 Archaeplastida
Pp3c16_16040V3.1 No alias photosystem I light harvesting complex gene 3 0.25 Archaeplastida
Pp3c18_8100V3.1 No alias photosystem II light harvesting complex gene 2.1 0.24 Archaeplastida
Pp3c19_20900V3.1 No alias light-harvesting chlorophyll B-binding protein 3 0.26 Archaeplastida
Pp3c1_34210V3.1 No alias light harvesting complex photosystem II subunit 6 0.25 Archaeplastida
Pp3c1_34240V3.1 No alias light harvesting complex photosystem II subunit 6 0.25 Archaeplastida
Pp3c20_23240V3.1 No alias photosystem I light harvesting complex gene 2 0.29 Archaeplastida
Pp3c21_3950V3.1 No alias photosystem II light harvesting complex gene 2.1 0.35 Archaeplastida
Pp3c22_5610V3.1 No alias photosystem II light harvesting complex gene 2.1 0.09 Archaeplastida
Pp3c26_12230V3.1 No alias light harvesting complex of photosystem II 5 0.25 Archaeplastida
Pp3c26_12240V3.1 No alias light harvesting complex of photosystem II 5 0.3 Archaeplastida
Pp3c26_6740V3.1 No alias photosystem II light harvesting complex gene 2.1 0.26 Archaeplastida
Pp3c27_7010V3.1 No alias photosystem I light harvesting complex gene 3 0.14 Archaeplastida
Pp3c27_7020V3.1 No alias photosystem I light harvesting complex gene 3 0.21 Archaeplastida
Pp3c2_35930V3.1 No alias photosystem II light harvesting complex gene 2.1 0.14 Archaeplastida
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.09 Archaeplastida
Pp3c2_36380V3.1 No alias photosystem II light harvesting complex gene 2.1 0.06 Archaeplastida
Pp3c2_36480V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.09 Archaeplastida
Pp3c2_36570V3.1 No alias photosystem II light harvesting complex gene 2.1 0.06 Archaeplastida
Pp3c3_12510V3.1 No alias photosystem I light harvesting complex gene 1 0.21 Archaeplastida
Pp3c3_4100V3.1 No alias photosystem II light harvesting complex gene 2.1 0.17 Archaeplastida
Pp3c4_28370V3.1 No alias light harvesting complex of photosystem II 5 0.12 Archaeplastida
Pp3c4_29150V3.1 No alias photosystem I light harvesting complex gene 1 0.2 Archaeplastida
Pp3c4_29270V3.1 No alias photosystem I light harvesting complex gene 1 0.2 Archaeplastida
Pp3c4_5680V3.1 No alias light harvesting complex photosystem II 0.24 Archaeplastida
Pp3c4_5690V3.1 No alias light harvesting complex photosystem II 0.28 Archaeplastida
Pp3c5_7150V3.1 No alias photosystem II light harvesting complex gene 2.1 0.1 Archaeplastida
Pp3c5_7180V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c6_12510V3.1 No alias photosystem II light harvesting complex gene 2.1 0.07 Archaeplastida
Pp3c6_22090V3.1 No alias photosystem I light harvesting complex gene 3 0.2 Archaeplastida
Pp3c6_6830V3.1 No alias photosystem II light harvesting complex gene 2.1 0.11 Archaeplastida
Smo104804 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Smo149722 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 Archaeplastida
Smo160411 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 Archaeplastida
Smo270427 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.05 Archaeplastida
Smo271833 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Smo423144 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.1 Archaeplastida
Smo444370 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 Archaeplastida
Smo446130 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 Archaeplastida
Solyc01g105030.3.1 No alias component LHCb6 of LHC-II complex 0.27 Archaeplastida
Solyc01g105050.3.1 No alias component LHCb6 of LHC-II complex 0.26 Archaeplastida
Solyc02g070940.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.24 Archaeplastida
Solyc02g070950.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.18 Archaeplastida
Solyc02g070970.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.11 Archaeplastida
Solyc02g070980.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g070990.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g071000.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.08 Archaeplastida
Solyc02g071010.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.24 Archaeplastida
Solyc02g071030.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.14 Archaeplastida
Solyc03g005760.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.2 Archaeplastida
Solyc03g005770.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.28 Archaeplastida
Solyc03g005780.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.1 Archaeplastida
Solyc03g115900.4.1 No alias component LHCa4 of LHC-I complex 0.29 Archaeplastida
Solyc05g056050.3.1 No alias component LHCa1 of LHC-I complex 0.24 Archaeplastida
Solyc05g056060.4.1 No alias Chlorophyll a-b binding protein 6A, chloroplastic... 0.03 Archaeplastida
Solyc06g063370.3.1 No alias component LHCb5 of LHC-II complex 0.2 Archaeplastida
Solyc06g069730.3.1 No alias component LHCa4 of LHC-I complex 0.16 Archaeplastida
Solyc07g022900.4.1 No alias component LHCa5 of LHC-I complex 0.05 Archaeplastida
Solyc07g047850.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.3 Archaeplastida
Solyc07g063600.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.2 Archaeplastida
Solyc08g067320.3.1 No alias Chlorophyll a-b binding protein 3A, chloroplastic... 0.03 Archaeplastida
Solyc08g067330.1.1 No alias Chlorophyll a-b binding protein 16, chloroplastic... 0.08 Archaeplastida
Solyc09g014520.3.1 No alias component LHCb4 of LHC-II complex 0.21 Archaeplastida
Solyc10g006230.3.1 No alias component LHCa2 of LHC-I complex 0.2 Archaeplastida
Solyc10g007690.3.1 No alias component LHCa3 of LHC-I complex 0.27 Archaeplastida
Solyc12g006140.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.1 Archaeplastida
Solyc12g009200.2.1 No alias component LHCa6 of LHC-I complex 0.03 Archaeplastida
Solyc12g011280.2.1 No alias component LHCa3 of LHC-I complex 0.22 Archaeplastida
Solyc12g011450.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.33 Archaeplastida
Zm00001e004129_P001 No alias component LHCa4 of LHC-I complex 0.24 Archaeplastida
Zm00001e004940_P001 No alias component LHCb1/2/3 of LHC-II complex 0.19 Archaeplastida
Zm00001e004941_P001 No alias component LHCb1/2/3 of LHC-II complex 0.19 Archaeplastida
Zm00001e006561_P001 No alias component LHCb6 of LHC-II complex 0.2 Archaeplastida
Zm00001e009885_P001 No alias component LHCa6 of LHC-I complex 0.03 Archaeplastida
Zm00001e010547_P001 No alias component LHCb4 of LHC-II complex 0.2 Archaeplastida
Zm00001e011045_P002 No alias component LHCb5 of LHC-II complex 0.2 Archaeplastida
Zm00001e013742_P001 No alias component LHCa1 of LHC-I complex 0.22 Archaeplastida
Zm00001e015945_P001 No alias component LHCa5 of LHC-I complex 0.04 Archaeplastida
Zm00001e020627_P001 No alias component LHCb1/2/3 of LHC-II complex 0.23 Archaeplastida
Zm00001e021290_P001 No alias component LHCb5 of LHC-II complex 0.16 Archaeplastida
Zm00001e022453_P001 No alias component LHCa4 of LHC-I complex 0.21 Archaeplastida
Zm00001e025141_P001 No alias component LHCa1 of LHC-I complex 0.15 Archaeplastida
Zm00001e026547_P001 No alias no hits & (original description: none) 0.18 Archaeplastida
Zm00001e032450_P001 No alias Chlorophyll a-b binding protein, chloroplastic OS=Zea... 0.19 Archaeplastida
Zm00001e033739_P001 No alias component LHCq of LHC-II complex 0.05 Archaeplastida
Zm00001e034922_P001 No alias Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... 0.18 Archaeplastida
Zm00001e035235_P001 No alias component LHCb4 of LHC-II complex 0.18 Archaeplastida
Zm00001e035249_P001 No alias component LHCb1/2/3 of LHC-II complex 0.18 Archaeplastida
Zm00001e035349_P002 No alias component LHCa2 of LHC-I complex 0.22 Archaeplastida
Zm00001e041918_P001 No alias component LHCb6 of LHC-II complex 0.14 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009637 response to blue light IEP Interproscan
BP GO:0009637 response to blue light RCA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
BP GO:0009768 photosynthesis, light harvesting in photosystem I IMP Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010114 response to red light IEP Interproscan
BP GO:0010114 response to red light RCA Interproscan
BP GO:0010155 regulation of proton transport RCA Interproscan
BP GO:0010218 response to far red light IEP Interproscan
BP GO:0010218 response to far red light RCA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
BP GO:0015979 photosynthesis ISS Interproscan
CC GO:0016020 membrane IDA Interproscan
MF GO:0016168 chlorophyll binding ISS Interproscan
CC GO:0030076 light-harvesting complex ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000165 MAPK cascade IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0003727 single-stranded RNA binding IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006740 NADPH regeneration IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008187 poly-pyrimidine tract binding IEP Neighborhood
MF GO:0008266 poly(U) RNA binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
CC GO:0009503 thylakoid light-harvesting complex IEP Neighborhood
CC GO:0009517 PSII associated light-harvesting complex II IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009533 chloroplast stromal thylakoid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009543 chloroplast thylakoid lumen IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009657 plastid organization IEP Neighborhood
BP GO:0009658 chloroplast organization IEP Neighborhood
BP GO:0009668 plastid membrane organization IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP Neighborhood
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Neighborhood
BP GO:0009780 photosynthetic NADP+ reduction IEP Neighborhood
CC GO:0009782 photosystem I antenna complex IEP Neighborhood
CC GO:0009783 photosystem II antenna complex IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009902 chloroplast relocation IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0010027 thylakoid membrane organization IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010196 nonphotochemical quenching IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010205 photoinhibition IEP Neighborhood
BP GO:0010206 photosystem II repair IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010270 photosystem II oxygen evolving complex assembly IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016144 S-glycoside biosynthetic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0017014 protein nitrosylation IEP Neighborhood
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018198 peptidyl-cysteine modification IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019750 chloroplast localization IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0019758 glycosinolate biosynthetic process IEP Neighborhood
BP GO:0019761 glucosinolate biosynthetic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030091 protein repair IEP Neighborhood
CC GO:0030093 chloroplast photosystem I IEP Neighborhood
CC GO:0030095 chloroplast photosystem II IEP Neighborhood
MF GO:0030504 inorganic diphosphate transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0031407 oxylipin metabolic process IEP Neighborhood
BP GO:0031408 oxylipin biosynthetic process IEP Neighborhood
BP GO:0031647 regulation of protein stability IEP Neighborhood
CC GO:0031977 thylakoid lumen IEP Neighborhood
CC GO:0031978 plastid thylakoid lumen IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033559 unsaturated fatty acid metabolic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0042550 photosystem I stabilization IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0042793 plastid transcription IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045038 protein import into chloroplast thylakoid membrane IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
MF GO:0048529 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050821 protein stabilization IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051644 plastid localization IEP Neighborhood
BP GO:0051656 establishment of organelle localization IEP Neighborhood
BP GO:0051667 establishment of plastid localization IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
CC GO:0080085 signal recognition particle, chloroplast targeting IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
BP GO:1901701 cellular response to oxygen-containing compound IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905156 negative regulation of photosynthesis IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:1990066 energy quenching IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 55 209
No external refs found!