Mp6g07060.1

Description : tryptophan-tRNA ligase

Gene families : OG0005340 (Archaeplastida) Phylogenetic Tree(s): OG0005340_tree ,
OG_05_0006011 (LandPlants) Phylogenetic Tree(s): OG_05_0006011_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp6g07060.1
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00115140	evm_27.TU.AmTr_v1...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Cpa\|evm.model.tig00000144.156	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Cre12.g522350	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	Archaeplastida
GSVIVT01020576001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.01	Archaeplastida
LOC_Os12g35570.1	No alias	tryptophan-tRNA ligase	0.05	Archaeplastida
Pp3c2_27540V3.1	No alias	Nucleotidylyl transferase superfamily protein	0.07	Archaeplastida
Smo442375	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	Archaeplastida
Zm00001e005381_P001	No alias	tryptophan-tRNA ligase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity	IEP	Neighborhood
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	Neighborhood
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Neighborhood
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Neighborhood
MF	GO:0004055	argininosuccinate synthase activity	IEP	Neighborhood
MF	GO:0004358	glutamate N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Neighborhood
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Neighborhood
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Neighborhood
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	Neighborhood
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Neighborhood
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	Neighborhood
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0004827	proline-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006144	purine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0006177	GMP biosynthetic process	IEP	Neighborhood
BP	GO:0006188	IMP biosynthetic process	IEP	Neighborhood
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006525	arginine metabolic process	IEP	Neighborhood
BP	GO:0006526	arginine biosynthetic process	IEP	Neighborhood
BP	GO:0006547	histidine metabolic process	IEP	Neighborhood
BP	GO:0006553	lysine metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0008094	DNA-dependent ATPase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008175	tRNA methyltransferase activity	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009085	lysine biosynthetic process	IEP	Neighborhood
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009163	nucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0009165	nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009259	ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016597	amino acid binding	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016842	amidine-lyase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0019238	cyclohydrolase activity	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
BP	GO:0019693	ribose phosphate metabolic process	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
CC	GO:0030684	preribosome	IEP	Neighborhood
MF	GO:0031406	carboxylic acid binding	IEP	Neighborhood
CC	GO:0032040	small-subunit processome	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
MF	GO:0043177	organic acid binding	IEP	Neighborhood
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0046037	GMP metabolic process	IEP	Neighborhood
BP	GO:0046040	IMP metabolic process	IEP	Neighborhood
BP	GO:0046112	nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0046148	pigment biosynthetic process	IEP	Neighborhood
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046451	diaminopimelate metabolic process	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
MF	GO:0061505	DNA topoisomerase II activity	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0090407	organophosphate biosynthetic process	IEP	Neighborhood
CC	GO:0098533	ATPase dependent transmembrane transport complex	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901070	guanosine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Neighborhood
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Neighborhood
CC	GO:1902495	transmembrane transporter complex	IEP	Neighborhood
CC	GO:1904949	ATPase complex	IEP	Neighborhood
CC	GO:1990351	transporter complex	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002305	aa-tRNA-synth_Ic	104	390

External Links

No external refs found!

Mp6g07060.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation