AT5G55480 (SVL1)


Aliases : SVL1

Description : SHV3-like 1


Gene families : OG0001385 (Archaeplastida) Phylogenetic Tree(s): OG0001385_tree ,
OG_05_0000896 (LandPlants) Phylogenetic Tree(s): OG_05_0000896_tree ,
OG_06_0001220 (SeedPlants) Phylogenetic Tree(s): OG_06_0001220_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55480
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003731001 No alias Glycerophosphodiester phosphodiesterase GDPDL6... 0.03 Archaeplastida
GSVIVT01037754001 No alias Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 Archaeplastida
Gb_18319 No alias Glycerophosphodiester phosphodiesterase GDPDL4... 0.06 Archaeplastida
LOC_Os04g39610.1 No alias Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 Archaeplastida
MA_10434415g0020 No alias Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4... 0.05 Archaeplastida
MA_10435620g0010 No alias Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4... 0.03 Archaeplastida
Pp3c1_13780V3.1 No alias SHV3-like 4 0.03 Archaeplastida
Pp3c2_26540V3.1 No alias SHV3-like 5 0.02 Archaeplastida
Pp3c2_28200V3.1 No alias PLC-like phosphodiesterase family protein 0.02 Archaeplastida
Solyc02g014490.4.1 No alias Glycerophosphodiester phosphodiesterase GDPDL7... 0.03 Archaeplastida
Zm00001e041063_P001 No alias Glycerophosphodiester phosphodiesterase GDPDL3... 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process RCA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0005982 starch metabolic process RCA Interproscan
BP GO:0006071 glycerol metabolic process ISS Interproscan
BP GO:0007155 cell adhesion RCA Interproscan
MF GO:0008889 glycerophosphodiester phosphodiesterase activity ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009653 anatomical structure morphogenesis RCA Interproscan
BP GO:0009664 plant-type cell wall organization RCA Interproscan
BP GO:0009832 plant-type cell wall biogenesis RCA Interproscan
BP GO:0010026 trichome differentiation IGI Interproscan
BP GO:0010054 trichoblast differentiation RCA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
BP GO:0010090 trichome morphogenesis RCA Interproscan
BP GO:0010442 guard cell morphogenesis IGI Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
BP GO:0042545 cell wall modification RCA Interproscan
BP GO:0045010 actin nucleation RCA Interproscan
CC GO:0046658 anchored component of plasma membrane IDA Interproscan
BP GO:0048364 root development RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0048869 cellular developmental process RCA Interproscan
BP GO:0052541 plant-type cell wall cellulose metabolic process IGI Interproscan
BP GO:0052541 plant-type cell wall cellulose metabolic process RCA Interproscan
BP GO:0052546 cell wall pectin metabolic process RCA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP Neighborhood
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004076 biotin synthase activity IEP Neighborhood
MF GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0004148 dihydrolipoyl dehydrogenase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
MF GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity IEP Neighborhood
MF GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
CC GO:0005835 fatty acid synthase complex IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006085 acetyl-CoA biosynthetic process IEP Neighborhood
BP GO:0006086 acetyl-CoA biosynthetic process from pyruvate IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006743 ubiquinone metabolic process IEP Neighborhood
BP GO:0006744 ubiquinone biosynthetic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006768 biotin metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009102 biotin biosynthetic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
MF GO:0009922 fatty acid elongase activity IEP Neighborhood
CC GO:0009923 fatty acid elongase complex IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010068 protoderm histogenesis IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Neighborhood
BP GO:0010495 long-distance posttranscriptional gene silencing IEP Neighborhood
BP GO:0010496 intercellular transport IEP Neighborhood
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015562 efflux transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016032 viral process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016631 enoyl-[acyl-carrier-protein] reductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033765 steroid dehydrogenase activity, acting on the CH-CH group of donors IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0040011 locomotion IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0044000 movement in host IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP Neighborhood
BP GO:0044766 multi-organism transport IEP Neighborhood
CC GO:0045298 tubulin complex IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046739 transport of virus in multicellular host IEP Neighborhood
BP GO:0046794 transport of virus IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048645 animal organ formation IEP Neighborhood
BP GO:0048653 anther development IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051192 prosthetic group binding IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051814 movement in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052126 movement in host environment IEP Neighborhood
BP GO:0052192 movement in environment of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0061062 regulation of nematode larval development IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0070919 production of siRNA involved in chromatin silencing by small RNA IEP Neighborhood
BP GO:0071258 cellular response to gravity IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1902579 multi-organism localization IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 371 662
No external refs found!