AT1G08550 (NPQ1, AVDE1)


Aliases : NPQ1, AVDE1

Description : non-photochemical quenching 1


Gene families : OG0005008 (Archaeplastida) Phylogenetic Tree(s): OG0005008_tree ,
OG_05_0007173 (LandPlants) Phylogenetic Tree(s): OG_05_0007173_tree ,
OG_06_0007823 (SeedPlants) Phylogenetic Tree(s): OG_06_0007823_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G08550
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Gb_27593 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 Archaeplastida
Mp7g15960.1 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 Archaeplastida
Pp3c3_13220V3.1 No alias non-photochemical quenching 1 0.03 Archaeplastida
Zm00001e008403_P001 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
BP GO:0006364 rRNA processing RCA Interproscan
BP GO:0006546 glycine catabolic process RCA Interproscan
BP GO:0006631 fatty acid metabolic process IGI Interproscan
BP GO:0006636 unsaturated fatty acid biosynthetic process RCA Interproscan
BP GO:0006655 phosphatidylglycerol biosynthetic process RCA Interproscan
BP GO:0006733 oxidoreduction coenzyme metabolic process RCA Interproscan
BP GO:0006766 vitamin metabolic process RCA Interproscan
BP GO:0008652 cellular amino acid biosynthetic process RCA Interproscan
BP GO:0009072 aromatic amino acid family metabolic process RCA Interproscan
BP GO:0009106 lipoate metabolic process RCA Interproscan
BP GO:0009108 coenzyme biosynthetic process RCA Interproscan
BP GO:0009117 nucleotide metabolic process RCA Interproscan
BP GO:0009408 response to heat IMP Interproscan
BP GO:0009416 response to light stimulus RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009543 chloroplast thylakoid lumen IDA Interproscan
BP GO:0009695 jasmonic acid biosynthetic process RCA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010028 xanthophyll cycle IMP Interproscan
BP GO:0015994 chlorophyll metabolic process IGI Interproscan
BP GO:0015994 chlorophyll metabolic process RCA Interproscan
BP GO:0015995 chlorophyll biosynthetic process RCA Interproscan
BP GO:0016117 carotenoid biosynthetic process RCA Interproscan
BP GO:0016122 xanthophyll metabolic process TAS Interproscan
BP GO:0019216 regulation of lipid metabolic process RCA Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0019748 secondary metabolic process RCA Interproscan
CC GO:0030095 chloroplast photosystem II TAS Interproscan
BP GO:0030154 cell differentiation RCA Interproscan
BP GO:0031408 oxylipin biosynthetic process RCA Interproscan
CC GO:0031977 thylakoid lumen IDA Interproscan
BP GO:0044272 sulfur compound biosynthetic process RCA Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Interproscan
MF GO:0046422 violaxanthin de-epoxidase activity IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000373 Group II intron splicing IEP Neighborhood
MF GO:0003727 single-stranded RNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003959 NADPH dehydrogenase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005982 starch metabolic process IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006000 fructose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0007584 response to nutrient IEP Neighborhood
MF GO:0008187 poly-pyrimidine tract binding IEP Neighborhood
MF GO:0008266 poly(U) RNA binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010266 response to vitamin B1 IEP Neighborhood
BP GO:0010478 chlororespiration IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016045 detection of bacterium IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016143 S-glycoside metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0019144 ADP-sugar diphosphatase activity IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019252 starch biosynthetic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019757 glycosinolate metabolic process IEP Neighborhood
BP GO:0019760 glucosinolate metabolic process IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
MF GO:0030385 ferredoxin:thioredoxin reductase activity IEP Neighborhood
BP GO:0030388 fructose 1,6-bisphosphate metabolic process IEP Neighborhood
BP GO:0033273 response to vitamin IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
MF GO:0044183 protein binding involved in protein folding IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061077 chaperone-mediated protein folding IEP Neighborhood
BP GO:0080005 photosystem stoichiometry adjustment IEP Neighborhood
MF GO:0080041 ADP-ribose pyrophosphohydrolase activity IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:0098543 detection of other organism IEP Neighborhood
BP GO:0098581 detection of external biotic stimulus IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR010788 VDE 119 360
No external refs found!