Coexpression cluster: Cluster_175 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 19.39% (32/165) 2.57 0.0 0.0
GO:1901363 heterocyclic compound binding 28.48% (47/165) 1.59 0.0 0.0
GO:0097159 organic cyclic compound binding 28.48% (47/165) 1.59 0.0 0.0
GO:0005488 binding 40.0% (66/165) 1.23 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 12.12% (20/165) 2.63 0.0 0.0
GO:0046483 heterocycle metabolic process 12.12% (20/165) 2.52 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 12.12% (20/165) 2.49 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 12.12% (20/165) 2.46 0.0 0.0
GO:0090304 nucleic acid metabolic process 10.3% (17/165) 2.76 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 12.12% (20/165) 2.22 0.0 1e-06
GO:0006396 RNA processing 4.85% (8/165) 4.04 0.0 1e-06
GO:0016070 RNA metabolic process 6.67% (11/165) 3.13 0.0 2e-06
GO:0003674 molecular_function 46.67% (77/165) 0.76 0.0 4e-06
GO:0035639 purine ribonucleoside triphosphate binding 13.94% (23/165) 1.81 0.0 5e-06
GO:0017076 purine nucleotide binding 13.94% (23/165) 1.6 2e-06 5.5e-05
GO:0032555 purine ribonucleotide binding 13.94% (23/165) 1.61 2e-06 5.6e-05
GO:0032553 ribonucleotide binding 13.94% (23/165) 1.59 2e-06 5.8e-05
GO:0000166 nucleotide binding 14.55% (24/165) 1.53 3e-06 6.2e-05
GO:1901265 nucleoside phosphate binding 14.55% (24/165) 1.53 3e-06 6.2e-05
GO:0097367 carbohydrate derivative binding 13.94% (23/165) 1.58 3e-06 6.3e-05
GO:0036094 small molecule binding 14.55% (24/165) 1.47 6e-06 0.000117
GO:0003723 RNA binding 4.85% (8/165) 2.91 1.3e-05 0.00024
GO:0044428 nuclear part 3.03% (5/165) 4.04 1.4e-05 0.000252
GO:0043168 anion binding 13.94% (23/165) 1.42 1.6e-05 0.000277
GO:0005524 ATP binding 10.91% (18/165) 1.63 2.3e-05 0.000374
GO:0008144 drug binding 10.91% (18/165) 1.55 4.6e-05 0.000728
GO:0006807 nitrogen compound metabolic process 15.15% (25/165) 1.18 0.000106 0.001622
GO:0006974 cellular response to DNA damage stimulus 2.42% (4/165) 3.84 0.000183 0.002226
GO:0033554 cellular response to stress 2.42% (4/165) 3.84 0.000183 0.002226
GO:0051716 cellular response to stimulus 2.42% (4/165) 3.84 0.000183 0.002226
GO:0006281 DNA repair 2.42% (4/165) 3.9 0.000155 0.002281
GO:0030554 adenyl nucleotide binding 10.91% (18/165) 1.4 0.000179 0.00238
GO:0044237 cellular metabolic process 15.76% (26/165) 1.11 0.000175 0.002411
GO:0032559 adenyl ribonucleotide binding 10.91% (18/165) 1.4 0.000175 0.00249
GO:0032040 small-subunit processome 1.21% (2/165) 6.38 0.000235 0.002777
GO:0034660 ncRNA metabolic process 2.42% (4/165) 3.54 0.000404 0.004634
GO:0003684 damaged DNA binding 1.21% (2/165) 5.97 0.000437 0.004879
GO:0017111 nucleoside-triphosphatase activity 4.85% (8/165) 2.16 0.000476 0.005172
GO:0006265 DNA topological change 1.21% (2/165) 5.8 0.00056 0.005787
GO:0003916 DNA topoisomerase activity 1.21% (2/165) 5.8 0.00056 0.005787
GO:0016462 pyrophosphatase activity 4.85% (8/165) 2.11 0.000582 0.005859
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.85% (8/165) 2.1 0.000624 0.006133
GO:0016817 hydrolase activity, acting on acid anhydrides 4.85% (8/165) 2.09 0.000659 0.006331
GO:0030684 preribosome 1.21% (2/165) 5.65 0.000699 0.006559
GO:0032550 purine ribonucleoside binding 3.03% (5/165) 2.77 0.000896 0.007114
GO:0001882 nucleoside binding 3.03% (5/165) 2.77 0.000896 0.007114
GO:0032561 guanyl ribonucleotide binding 3.03% (5/165) 2.77 0.000896 0.007114
GO:0001883 purine nucleoside binding 3.03% (5/165) 2.77 0.000896 0.007114
GO:0005525 GTP binding 3.03% (5/165) 2.77 0.000896 0.007114
GO:0032549 ribonucleoside binding 3.03% (5/165) 2.77 0.000896 0.007114
GO:0034470 ncRNA processing 1.82% (3/165) 4.06 0.000785 0.007204
GO:0019001 guanyl nucleotide binding 3.03% (5/165) 2.75 0.00094 0.007325
GO:0071103 DNA conformation change 1.21% (2/165) 5.38 0.001019 0.007797
GO:0140097 catalytic activity, acting on DNA 1.82% (3/165) 4.0 0.000892 0.008007
GO:0043170 macromolecule metabolic process 12.73% (21/165) 1.06 0.001125 0.008445
GO:0009987 cellular process 16.36% (27/165) 0.89 0.001343 0.009907
GO:0008536 Ran GTPase binding 1.21% (2/165) 5.16 0.001398 0.010131
GO:0006259 DNA metabolic process 3.64% (6/165) 2.24 0.001797 0.012794
GO:0019899 enzyme binding 1.82% (3/165) 3.62 0.0019 0.013301
GO:0044238 primary metabolic process 15.15% (25/165) 0.87 0.002509 0.017269
GO:0003677 DNA binding 4.85% (8/165) 1.76 0.002739 0.018543
GO:0005515 protein binding 10.3% (17/165) 1.08 0.002923 0.01947
GO:0016072 rRNA metabolic process 1.21% (2/165) 4.58 0.003168 0.020444
GO:0006364 rRNA processing 1.21% (2/165) 4.58 0.003168 0.020444
GO:0044424 intracellular part 6.06% (10/165) 1.49 0.003263 0.020735
GO:0043167 ion binding 16.97% (28/165) 0.77 0.003685 0.023061
GO:0000176 nuclear exosome (RNase complex) 0.61% (1/165) 7.97 0.003994 0.023908
GO:0000012 single strand break repair 0.61% (1/165) 7.97 0.003994 0.023908
GO:0000178 exosome (RNase complex) 0.61% (1/165) 7.97 0.003994 0.023908
GO:0051276 chromosome organization 1.21% (2/165) 4.38 0.004131 0.024374
GO:0071704 organic substance metabolic process 15.15% (25/165) 0.8 0.004456 0.025923
GO:0005634 nucleus 2.42% (4/165) 2.58 0.004633 0.026574
GO:0031267 small GTPase binding 1.21% (2/165) 4.27 0.004839 0.027008
GO:0017016 Ras GTPase binding 1.21% (2/165) 4.27 0.004839 0.027008
GO:0044464 cell part 6.06% (10/165) 1.39 0.005315 0.029269
GO:0016874 ligase activity 1.82% (3/165) 3.03 0.006059 0.032925
GO:0043226 organelle 3.64% (6/165) 1.87 0.006292 0.033316
GO:0043229 intracellular organelle 3.64% (6/165) 1.88 0.00622 0.033362
GO:0004176 ATP-dependent peptidase activity 0.61% (1/165) 6.97 0.007973 0.033946
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 0.61% (1/165) 6.97 0.007973 0.033946
GO:1905354 exoribonuclease complex 0.61% (1/165) 6.97 0.007973 0.033946
GO:0004576 oligosaccharyl transferase activity 0.61% (1/165) 6.97 0.007973 0.033946
GO:0010965 regulation of mitotic sister chromatid separation 0.61% (1/165) 6.97 0.007973 0.033946
GO:0033045 regulation of sister chromatid segregation 0.61% (1/165) 6.97 0.007973 0.033946
GO:0033047 regulation of mitotic sister chromatid segregation 0.61% (1/165) 6.97 0.007973 0.033946
GO:0051783 regulation of nuclear division 0.61% (1/165) 6.97 0.007973 0.033946
GO:1905818 regulation of chromosome separation 0.61% (1/165) 6.97 0.007973 0.033946
GO:0051983 regulation of chromosome segregation 0.61% (1/165) 6.97 0.007973 0.033946
GO:1901987 regulation of cell cycle phase transition 0.61% (1/165) 6.97 0.007973 0.033946
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 0.61% (1/165) 6.97 0.007973 0.033946
GO:1901990 regulation of mitotic cell cycle phase transition 0.61% (1/165) 6.97 0.007973 0.033946
GO:0030071 regulation of mitotic metaphase/anaphase transition 0.61% (1/165) 6.97 0.007973 0.033946
GO:0007088 regulation of mitotic nuclear division 0.61% (1/165) 6.97 0.007973 0.033946
GO:0033044 regulation of chromosome organization 0.61% (1/165) 6.97 0.007973 0.033946
GO:0051020 GTPase binding 1.21% (2/165) 4.01 0.006834 0.035727
GO:0043231 intracellular membrane-bounded organelle 2.42% (4/165) 2.32 0.008817 0.036781
GO:0043227 membrane-bounded organelle 2.42% (4/165) 2.32 0.008817 0.036781
GO:0006397 mRNA processing 1.21% (2/165) 3.76 0.009636 0.039797
GO:0044422 organelle part 3.03% (5/165) 2.04 0.007807 0.039804
GO:0044446 intracellular organelle part 3.03% (5/165) 2.04 0.007807 0.039804
GO:0046907 intracellular transport 1.82% (3/165) 2.76 0.010129 0.041014
GO:0051649 establishment of localization in cell 1.82% (3/165) 2.76 0.010129 0.041014
GO:0006177 GMP biosynthetic process 0.61% (1/165) 6.38 0.011935 0.043622
GO:0000152 nuclear ubiquitin ligase complex 0.61% (1/165) 6.38 0.011935 0.043622
GO:0005680 anaphase-promoting complex 0.61% (1/165) 6.38 0.011935 0.043622
GO:0005049 nuclear export signal receptor activity 0.61% (1/165) 6.38 0.011935 0.043622
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 0.61% (1/165) 6.38 0.011935 0.043622
GO:0007346 regulation of mitotic cell cycle 0.61% (1/165) 6.38 0.011935 0.043622
GO:0031461 cullin-RING ubiquitin ligase complex 0.61% (1/165) 6.38 0.011935 0.043622
GO:0010564 regulation of cell cycle process 0.61% (1/165) 6.38 0.011935 0.043622
GO:0017056 structural constituent of nuclear pore 0.61% (1/165) 6.38 0.011935 0.043622
GO:0046037 GMP metabolic process 0.61% (1/165) 6.38 0.011935 0.043622
GO:1901070 guanosine-containing compound biosynthetic process 0.61% (1/165) 6.38 0.011935 0.043622
GO:0051641 cellular localization 1.82% (3/165) 2.66 0.012219 0.044267
GO:0016071 mRNA metabolic process 1.21% (2/165) 3.51 0.01344 0.04704
GO:0004386 helicase activity 1.21% (2/165) 3.51 0.01344 0.04704
GO:0006950 response to stress 2.42% (4/165) 2.15 0.013103 0.047055
GO:0034654 nucleobase-containing compound biosynthetic process 2.42% (4/165) 2.14 0.013297 0.047343
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_22 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.047 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.051 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.07 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_257 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_108 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_184 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.037 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_246 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_48 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_91 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_51 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_132 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.092 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.049 Archaeplastida Compare
Zea mays HCCA Cluster_310 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_363 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_12 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.039 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.042 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_148 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_158 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_135 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.061 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.046 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.072 Archaeplastida Compare
Picea abies HCCA Cluster_360 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.063 Archaeplastida Compare
Picea abies HCCA Cluster_399 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_400 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_407 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_427 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_435 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_495 0.037 Archaeplastida Compare
Picea abies HCCA Cluster_497 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.044 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.053 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.067 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.051 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.077 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_256 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_62 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_63 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.044 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.063 Archaeplastida Compare
Vitis vinifera HCCA Cluster_196 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.058 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_92 0.019 Archaeplastida Compare
Sequences (165) (download table)

InterPro Domains

GO Terms

Family Terms