Coexpression cluster: Cluster_178 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009236 cobalamin biosynthetic process 3.12% (2/64) 8.25 1.1e-05 0.000919
GO:0009235 cobalamin metabolic process 3.12% (2/64) 8.25 1.1e-05 0.000919
GO:1901360 organic cyclic compound metabolic process 12.5% (8/64) 2.17 0.000387 0.013305
GO:0006725 cellular aromatic compound metabolic process 12.5% (8/64) 2.21 0.000321 0.013784
GO:0006767 water-soluble vitamin metabolic process 3.12% (2/64) 5.44 0.000948 0.016311
GO:0009110 vitamin biosynthetic process 3.12% (2/64) 5.44 0.000948 0.016311
GO:0042364 water-soluble vitamin biosynthetic process 3.12% (2/64) 5.44 0.000948 0.016311
GO:0033014 tetrapyrrole biosynthetic process 3.12% (2/64) 5.44 0.000948 0.016311
GO:0006766 vitamin metabolic process 3.12% (2/64) 5.44 0.000948 0.016311
GO:0046483 heterocycle metabolic process 12.5% (8/64) 2.21 0.000312 0.017916
GO:0009982 pseudouridine synthase activity 3.12% (2/64) 5.16 0.001408 0.02202
GO:0016070 RNA metabolic process 7.81% (5/64) 2.47 0.002084 0.022408
GO:0033013 tetrapyrrole metabolic process 3.12% (2/64) 4.92 0.001955 0.022416
GO:0001522 pseudouridine synthesis 3.12% (2/64) 4.92 0.001955 0.022416
GO:0090304 nucleic acid metabolic process 9.38% (6/64) 2.25 0.001597 0.022885
GO:0034641 cellular nitrogen compound metabolic process 12.5% (8/64) 1.81 0.001899 0.025122
GO:0018130 heterocycle biosynthetic process 6.25% (4/64) 2.71 0.003308 0.025861
GO:0016866 intramolecular transferase activity 3.12% (2/64) 4.54 0.003302 0.027042
GO:0070552 BRISC complex 1.56% (1/64) 8.25 0.003295 0.028341
GO:0070531 BRCA1-A complex 1.56% (1/64) 8.25 0.003295 0.028341
GO:0016852 sirohydrochlorin cobaltochelatase activity 1.56% (1/64) 8.25 0.003295 0.028341
GO:0019438 aromatic compound biosynthetic process 6.25% (4/64) 2.75 0.003 0.030353
GO:0004222 metalloendopeptidase activity 3.12% (2/64) 4.39 0.004098 0.030649
GO:1901362 organic cyclic compound biosynthetic process 6.25% (4/64) 2.6 0.004283 0.030695
GO:0006139 nucleobase-containing compound metabolic process 9.38% (6/64) 1.95 0.004506 0.031001
GO:0009451 RNA modification 3.12% (2/64) 4.04 0.00661 0.037898
GO:0000428 DNA-directed RNA polymerase complex 1.56% (1/64) 7.25 0.00658 0.039027
GO:0005666 RNA polymerase III complex 1.56% (1/64) 7.25 0.00658 0.039027
GO:0055029 nuclear DNA-directed RNA polymerase complex 1.56% (1/64) 7.25 0.00658 0.039027
GO:0008237 metallopeptidase activity 3.12% (2/64) 4.08 0.006266 0.041453
GO:0006807 nitrogen compound metabolic process 17.19% (11/64) 1.19 0.007658 0.042491
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_51 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_244 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_212 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_106 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_135 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_183 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_177 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_110 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_241 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_185 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_216 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_128 0.025 Archaeplastida Compare
Sequences (64) (download table)

InterPro Domains

GO Terms

Family Terms