Coexpression cluster: Cluster_486 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000075 cell cycle checkpoint 2.41% (2/83) 7.33 6.9e-05 0.014256
GO:0045786 negative regulation of cell cycle 2.41% (2/83) 6.84 0.000138 0.014368
GO:0051985 negative regulation of chromosome segregation 1.2% (1/83) 8.65 0.00249 0.014796
GO:0051784 negative regulation of nuclear division 1.2% (1/83) 8.65 0.00249 0.014796
GO:0045930 negative regulation of mitotic cell cycle 1.2% (1/83) 8.65 0.00249 0.014796
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 1.2% (1/83) 8.65 0.00249 0.014796
GO:0045839 negative regulation of mitotic nuclear division 1.2% (1/83) 8.65 0.00249 0.014796
GO:1905348 endonuclease complex 1.2% (1/83) 8.65 0.00249 0.014796
GO:0033048 negative regulation of mitotic sister chromatid segregation 1.2% (1/83) 8.65 0.00249 0.014796
GO:0033046 negative regulation of sister chromatid segregation 1.2% (1/83) 8.65 0.00249 0.014796
GO:0007093 mitotic cell cycle checkpoint 1.2% (1/83) 8.65 0.00249 0.014796
GO:0007094 mitotic spindle assembly checkpoint 1.2% (1/83) 8.65 0.00249 0.014796
GO:0031577 spindle checkpoint 1.2% (1/83) 8.65 0.00249 0.014796
GO:0071173 spindle assembly checkpoint 1.2% (1/83) 8.65 0.00249 0.014796
GO:0071174 mitotic spindle checkpoint 1.2% (1/83) 8.65 0.00249 0.014796
GO:0010948 negative regulation of cell cycle process 1.2% (1/83) 8.65 0.00249 0.014796
GO:1902555 endoribonuclease complex 1.2% (1/83) 8.65 0.00249 0.014796
GO:2001251 negative regulation of chromosome organization 1.2% (1/83) 8.65 0.00249 0.014796
GO:2000816 negative regulation of mitotic sister chromatid separation 1.2% (1/83) 8.65 0.00249 0.014796
GO:1905819 negative regulation of chromosome separation 1.2% (1/83) 8.65 0.00249 0.014796
GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle 1.2% (1/83) 8.65 0.00249 0.014796
GO:1901991 negative regulation of mitotic cell cycle phase transition 1.2% (1/83) 8.65 0.00249 0.014796
GO:1901988 negative regulation of cell cycle phase transition 1.2% (1/83) 8.65 0.00249 0.014796
GO:0048523 negative regulation of cellular process 2.41% (2/83) 6.4 0.000259 0.017926
GO:0030677 ribonuclease P complex 1.2% (1/83) 9.65 0.001246 0.01993
GO:0030488 tRNA methylation 1.2% (1/83) 9.65 0.001246 0.01993
GO:0016426 tRNA (adenine) methyltransferase activity 1.2% (1/83) 9.65 0.001246 0.01993
GO:0043527 tRNA methyltransferase complex 1.2% (1/83) 9.65 0.001246 0.01993
GO:0031515 tRNA (m1A) methyltransferase complex 1.2% (1/83) 9.65 0.001246 0.01993
GO:0034708 methyltransferase complex 1.2% (1/83) 9.65 0.001246 0.01993
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 1.2% (1/83) 9.65 0.001246 0.01993
GO:0007088 regulation of mitotic nuclear division 1.2% (1/83) 7.33 0.006213 0.025339
GO:0010965 regulation of mitotic sister chromatid separation 1.2% (1/83) 7.33 0.006213 0.025339
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.2% (1/83) 7.33 0.006213 0.025339
GO:1905818 regulation of chromosome separation 1.2% (1/83) 7.33 0.006213 0.025339
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.2% (1/83) 7.33 0.006213 0.025339
GO:1901990 regulation of mitotic cell cycle phase transition 1.2% (1/83) 7.33 0.006213 0.025339
GO:1901987 regulation of cell cycle phase transition 1.2% (1/83) 7.33 0.006213 0.025339
GO:0051983 regulation of chromosome segregation 1.2% (1/83) 7.33 0.006213 0.025339
GO:0051783 regulation of nuclear division 1.2% (1/83) 7.33 0.006213 0.025339
GO:0033047 regulation of mitotic sister chromatid segregation 1.2% (1/83) 7.33 0.006213 0.025339
GO:0033045 regulation of sister chromatid segregation 1.2% (1/83) 7.33 0.006213 0.025339
GO:0033044 regulation of chromosome organization 1.2% (1/83) 7.33 0.006213 0.025339
GO:0048519 negative regulation of biological process 2.41% (2/83) 5.01 0.001806 0.026837
GO:0044444 cytoplasmic part 4.82% (4/83) 2.55 0.005047 0.026916
GO:0032259 methylation 2.41% (2/83) 5.74 0.000652 0.027119
GO:0051726 regulation of cell cycle 2.41% (2/83) 5.74 0.000652 0.027119
GO:0001510 RNA methylation 1.2% (1/83) 7.65 0.004973 0.027223
GO:0051129 negative regulation of cellular component organization 1.2% (1/83) 7.65 0.004973 0.027223
GO:0010639 negative regulation of organelle organization 1.2% (1/83) 7.65 0.004973 0.027223
GO:1990904 ribonucleoprotein complex 3.61% (3/83) 2.97 0.006842 0.027367
GO:0030896 checkpoint clamp complex 1.2% (1/83) 7.06 0.007451 0.028178
GO:0007346 regulation of mitotic cell cycle 1.2% (1/83) 7.06 0.007451 0.028178
GO:0010564 regulation of cell cycle process 1.2% (1/83) 7.06 0.007451 0.028178
GO:0008175 tRNA methyltransferase activity 1.2% (1/83) 6.84 0.008687 0.032267
GO:0000077 DNA damage checkpoint 1.2% (1/83) 6.65 0.009922 0.03498
GO:0031570 DNA integrity checkpoint 1.2% (1/83) 6.65 0.009922 0.03498
GO:0032991 protein-containing complex 7.23% (6/83) 2.4 0.00101 0.035002
GO:0008168 methyltransferase activity 3.61% (3/83) 2.79 0.00961 0.035068
GO:1902494 catalytic complex 2.41% (2/83) 3.67 0.010924 0.037248
GO:1903047 mitotic cell cycle process 1.2% (1/83) 6.48 0.011156 0.037426
GO:0016741 transferase activity, transferring one-carbon groups 3.61% (3/83) 2.69 0.011409 0.03767
GO:0016070 RNA metabolic process 3.61% (3/83) 2.72 0.010923 0.037865
GO:0005852 eukaryotic translation initiation factor 3 complex 1.2% (1/83) 6.33 0.012388 0.04026
GO:0006396 RNA processing 2.41% (2/83) 3.53 0.013166 0.042131
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_57 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_329 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_166 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_171 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_411 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_530 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_318 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_30 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_110 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_242 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.027 Archaeplastida Compare
Sequences (83) (download table)

InterPro Domains

GO Terms

Family Terms