Coexpression cluster: Cluster_53 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004853 uroporphyrinogen decarboxylase activity 2.82% (2/71) 9.87 1e-06 0.000178
GO:0004812 aminoacyl-tRNA ligase activity 4.23% (3/71) 5.5 4.2e-05 0.001111
GO:0043038 amino acid activation 4.23% (3/71) 5.5 4.2e-05 0.001111
GO:0043039 tRNA aminoacylation 4.23% (3/71) 5.5 4.2e-05 0.001111
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.23% (3/71) 5.5 4.2e-05 0.001111
GO:0006779 porphyrin-containing compound biosynthetic process 2.82% (2/71) 7.29 7.3e-05 0.001667
GO:0140101 catalytic activity, acting on a tRNA 4.23% (3/71) 5.05 0.000108 0.002137
GO:0006418 tRNA aminoacylation for protein translation 4.23% (3/71) 5.7 2.8e-05 0.002198
GO:0006399 tRNA metabolic process 4.23% (3/71) 4.89 0.00015 0.002642
GO:0006778 porphyrin-containing compound metabolic process 2.82% (2/71) 6.63 0.000189 0.002735
GO:0033014 tetrapyrrole biosynthetic process 2.82% (2/71) 6.63 0.000189 0.002735
GO:0034660 ncRNA metabolic process 4.23% (3/71) 4.55 0.000298 0.003945
GO:0033013 tetrapyrrole metabolic process 2.82% (2/71) 6.17 0.000358 0.004377
GO:0016874 ligase activity 4.23% (3/71) 4.16 0.000652 0.007406
GO:0034641 cellular nitrogen compound metabolic process 8.45% (6/71) 2.36 0.001138 0.012063
GO:0046483 heterocycle metabolic process 7.04% (5/71) 2.56 0.001633 0.016229
GO:0006520 cellular amino acid metabolic process 4.23% (3/71) 3.62 0.001928 0.017027
GO:0006725 cellular aromatic compound metabolic process 7.04% (5/71) 2.51 0.001898 0.017754
GO:0002161 aminoacyl-tRNA editing activity 1.41% (1/71) 8.87 0.00213 0.017825
GO:1901360 organic cyclic compound metabolic process 7.04% (5/71) 2.44 0.002365 0.018801
GO:0140098 catalytic activity, acting on RNA 4.23% (3/71) 3.47 0.002584 0.019566
GO:0016831 carboxy-lyase activity 2.82% (2/71) 4.68 0.002801 0.020247
GO:0006817 phosphate ion transport 1.41% (1/71) 7.87 0.004255 0.028193
GO:0005315 inorganic phosphate transmembrane transporter activity 1.41% (1/71) 7.87 0.004255 0.028193
GO:0016830 carbon-carbon lyase activity 2.82% (2/71) 4.29 0.004785 0.030432
GO:0051188 cofactor biosynthetic process 2.82% (2/71) 4.07 0.006451 0.039453
GO:0016070 RNA metabolic process 4.23% (3/71) 2.94 0.00713 0.041986
GO:0006082 organic acid metabolic process 4.23% (3/71) 2.79 0.009514 0.048796
GO:0003690 double-stranded DNA binding 2.82% (2/71) 3.84 0.008723 0.049536
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_34 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.066 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.042 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_247 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_124 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_20 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_197 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_266 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.064 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.05 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_53 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_425 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.046 Archaeplastida Compare
Oryza sativa HCCA Cluster_110 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_172 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_248 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.039 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_67 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_73 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_147 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_271 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_47 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.042 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_160 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.039 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_119 0.023 Archaeplastida Compare
Sequences (71) (download table)

InterPro Domains

GO Terms

Family Terms