Coexpression cluster: Cluster_49 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 14.29% (8/56) 5.27 0.0 0.0
GO:0016070 RNA metabolic process 14.29% (8/56) 3.97 0.0 3e-06
GO:0044452 nucleolar part 3.57% (2/56) 9.56 2e-06 3.9e-05
GO:0034457 Mpp10 complex 3.57% (2/56) 9.56 2e-06 3.9e-05
GO:0005732 small nucleolar ribonucleoprotein complex 3.57% (2/56) 9.56 2e-06 3.9e-05
GO:0034470 ncRNA processing 7.14% (4/56) 5.43 2e-06 4.6e-05
GO:0090304 nucleic acid metabolic process 14.29% (8/56) 3.35 1e-06 4.9e-05
GO:0016072 rRNA metabolic process 5.36% (3/56) 6.5 5e-06 7.5e-05
GO:0006364 rRNA processing 5.36% (3/56) 6.5 5e-06 7.5e-05
GO:0006139 nucleobase-containing compound metabolic process 14.29% (8/56) 2.99 7e-06 9.3e-05
GO:0006725 cellular aromatic compound metabolic process 14.29% (8/56) 2.85 1.4e-05 0.00016
GO:0046483 heterocycle metabolic process 14.29% (8/56) 2.87 1.3e-05 0.00016
GO:1901360 organic cyclic compound metabolic process 14.29% (8/56) 2.82 1.7e-05 0.000172
GO:0034660 ncRNA metabolic process 7.14% (4/56) 4.55 2.7e-05 0.000261
GO:0034641 cellular nitrogen compound metabolic process 14.29% (8/56) 2.4 0.000124 0.001116
GO:0042274 ribosomal small subunit biogenesis 1.79% (1/56) 9.56 0.001327 0.008533
GO:0006382 adenosine to inosine editing 1.79% (1/56) 9.56 0.001327 0.008533
GO:0002100 tRNA wobble adenosine to inosine editing 1.79% (1/56) 9.56 0.001327 0.008533
GO:0008251 tRNA-specific adenosine deaminase activity 1.79% (1/56) 9.56 0.001327 0.008533
GO:0016553 base conversion or substitution editing 1.79% (1/56) 9.56 0.001327 0.008533
GO:0006397 mRNA processing 3.57% (2/56) 5.27 0.001242 0.010483
GO:0016071 mRNA metabolic process 3.57% (2/56) 5.0 0.0018 0.011047
GO:0030688 preribosome, small subunit precursor 1.79% (1/56) 8.56 0.002653 0.014923
GO:0004000 adenosine deaminase activity 1.79% (1/56) 8.56 0.002653 0.014923
GO:0005634 nucleus 5.36% (3/56) 3.32 0.003454 0.018651
GO:0043231 intracellular membrane-bounded organelle 5.36% (3/56) 3.08 0.005425 0.027127
GO:0043227 membrane-bounded organelle 5.36% (3/56) 3.08 0.005425 0.027127
GO:0009987 cellular process 21.43% (12/56) 1.14 0.006589 0.031767
GO:0043226 organelle 7.14% (4/56) 2.38 0.007298 0.03284
GO:0043229 intracellular organelle 7.14% (4/56) 2.38 0.007298 0.03284
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.79% (1/56) 6.97 0.007938 0.033489
GO:0002097 tRNA wobble base modification 1.79% (1/56) 6.97 0.007938 0.033489
GO:0044428 nuclear part 3.57% (2/56) 3.88 0.008187 0.033494
GO:1990904 ribonucleoprotein complex 5.36% (3/56) 2.84 0.008535 0.033888
GO:0019239 deaminase activity 1.79% (1/56) 6.75 0.009255 0.035699
GO:0030684 preribosome 1.79% (1/56) 6.56 0.010571 0.03964
GO:0031047 gene silencing by RNA 1.79% (1/56) 6.24 0.013196 0.04688
GO:0016458 gene silencing 1.79% (1/56) 6.24 0.013196 0.04688
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_23 0.062 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_91 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_127 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_189 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_245 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_257 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_65 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.041 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_87 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_117 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_144 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_312 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_331 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_338 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.097 Archaeplastida Compare
Zea mays HCCA Cluster_158 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_229 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_283 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_299 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_321 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_322 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_328 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_353 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_360 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_176 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_87 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_221 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_277 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_326 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_518 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_543 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_348 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_350 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_25 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_82 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_94 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_163 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_172 0.058 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_193 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_212 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_140 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.087 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_143 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_154 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_226 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_232 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_139 0.019 Archaeplastida Compare
Sequences (56) (download table)

InterPro Domains

GO Terms

Family Terms