Coexpression cluster: Cluster_232 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 40.61% (67/165) 0.52 0.000446 0.024209
GO:0003690 double-stranded DNA binding 1.82% (3/165) 4.28 0.000505 0.024353
GO:0008175 tRNA methyltransferase activity 1.21% (2/165) 5.98 0.000432 0.026754
GO:0140098 catalytic activity, acting on RNA 3.03% (5/165) 3.02 0.000401 0.028984
GO:0006399 tRNA metabolic process 2.42% (4/165) 3.55 0.000394 0.034222
GO:0003723 RNA binding 4.24% (7/165) 2.42 0.000371 0.040257
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 1.21% (2/165) 6.98 9.3e-05 0.040553
GO:0034660 ncRNA metabolic process 2.42% (4/165) 3.17 0.001065 0.042005
GO:0005488 binding 26.06% (43/165) 0.67 0.000988 0.0429
GO:0006400 tRNA modification 1.21% (2/165) 5.28 0.001186 0.042911
GO:0016021 integral component of membrane 5.45% (9/165) 1.78 0.001344 0.044866
GO:0004375 glycine dehydrogenase (decarboxylating) activity 0.61% (1/165) 7.98 0.003969 0.046551
GO:0006544 glycine metabolic process 0.61% (1/165) 7.98 0.003969 0.046551
GO:0010024 phytochromobilin biosynthetic process 0.61% (1/165) 7.98 0.003969 0.046551
GO:0009306 protein secretion 0.61% (1/165) 7.98 0.003969 0.046551
GO:0005887 integral component of plasma membrane 0.61% (1/165) 7.98 0.003969 0.046551
GO:0006546 glycine catabolic process 0.61% (1/165) 7.98 0.003969 0.046551
GO:0002790 peptide secretion 0.61% (1/165) 7.98 0.003969 0.046551
GO:0042133 neurotransmitter metabolic process 0.61% (1/165) 7.98 0.003969 0.046551
GO:0042135 neurotransmitter catabolic process 0.61% (1/165) 7.98 0.003969 0.046551
GO:0098791 Golgi subcompartment 0.61% (1/165) 7.98 0.003969 0.046551
GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 0.61% (1/165) 7.98 0.003969 0.046551
GO:0031984 organelle subcompartment 0.61% (1/165) 7.98 0.003969 0.046551
GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity 0.61% (1/165) 7.98 0.003969 0.046551
GO:0004817 cysteine-tRNA ligase activity 0.61% (1/165) 7.98 0.003969 0.046551
GO:0001505 regulation of neurotransmitter levels 0.61% (1/165) 7.98 0.003969 0.046551
GO:0006423 cysteinyl-tRNA aminoacylation 0.61% (1/165) 7.98 0.003969 0.046551
GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity 0.61% (1/165) 7.98 0.003969 0.046551
GO:0051202 phytochromobilin metabolic process 0.61% (1/165) 7.98 0.003969 0.046551
GO:0050897 cobalt ion binding 0.61% (1/165) 7.98 0.003969 0.046551
GO:0009071 serine family amino acid catabolic process 0.61% (1/165) 7.98 0.003969 0.046551
GO:0005795 Golgi stack 0.61% (1/165) 7.98 0.003969 0.046551
GO:0031224 intrinsic component of membrane 5.45% (9/165) 1.76 0.001505 0.046653
GO:0016423 tRNA (guanine) methyltransferase activity 1.21% (2/165) 6.17 0.000324 0.046942
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_11 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_17 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_20 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_29 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_67 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_76 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_133 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_140 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_199 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_205 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_214 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_219 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_246 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_22 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_89 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_180 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_96 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_113 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_173 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_182 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_12 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_64 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_92 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_194 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_223 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_30 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_184 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_351 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_83 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_134 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_139 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_175 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_27 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_42 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_50 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_149 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_209 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_233 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_279 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_295 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_369 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_485 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_515 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_529 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.055 Archaeplastida Compare
Oryza sativa HCCA Cluster_110 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_112 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_139 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_166 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_211 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_241 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_253 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.042 Archaeplastida Compare
Oryza sativa HCCA Cluster_281 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_282 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_314 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_352 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_103 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_173 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_181 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.045 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_122 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_177 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_212 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_245 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_268 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_278 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_27 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_40 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_158 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_159 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_160 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_180 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_184 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_194 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_211 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_235 0.033 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.021 Archaeplastida Compare
Sequences (165) (download table)

InterPro Domains

GO Terms

Family Terms