Coexpression cluster: Cluster_52 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 14.53% (17/117) 6.14 0.0 0.0
GO:0009521 photosystem 12.82% (15/117) 6.19 0.0 0.0
GO:0015979 photosynthesis 12.82% (15/117) 6.0 0.0 0.0
GO:0098796 membrane protein complex 15.38% (18/117) 4.69 0.0 0.0
GO:0009522 photosystem I 5.98% (7/117) 6.86 0.0 0.0
GO:0009523 photosystem II 6.84% (8/117) 5.85 0.0 0.0
GO:0009538 photosystem I reaction center 4.27% (5/117) 7.37 0.0 0.0
GO:0032991 protein-containing complex 16.24% (19/117) 2.65 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 5.13% (6/117) 5.79 0.0 0.0
GO:0044425 membrane part 15.38% (18/117) 2.61 0.0 0.0
GO:1990204 oxidoreductase complex 5.13% (6/117) 5.21 0.0 0.0
GO:0044464 cell part 17.09% (20/117) 2.15 0.0 1e-06
GO:0044424 intracellular part 16.24% (19/117) 2.21 0.0 1e-06
GO:0009145 purine nucleoside triphosphate biosynthetic process 4.27% (5/117) 4.57 2e-06 3.5e-05
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 4.27% (5/117) 4.57 2e-06 3.5e-05
GO:0009142 nucleoside triphosphate biosynthetic process 4.27% (5/117) 4.57 2e-06 3.5e-05
GO:0009201 ribonucleoside triphosphate biosynthetic process 4.27% (5/117) 4.57 2e-06 3.5e-05
GO:0006754 ATP biosynthetic process 4.27% (5/117) 4.57 2e-06 3.5e-05
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 4.27% (5/117) 4.45 3e-06 4.4e-05
GO:0009156 ribonucleoside monophosphate biosynthetic process 4.27% (5/117) 4.45 3e-06 4.4e-05
GO:0009124 nucleoside monophosphate biosynthetic process 4.27% (5/117) 4.45 3e-06 4.4e-05
GO:0009127 purine nucleoside monophosphate biosynthetic process 4.27% (5/117) 4.45 3e-06 4.4e-05
GO:0006164 purine nucleotide biosynthetic process 4.27% (5/117) 4.27 6e-06 5.3e-05
GO:0009161 ribonucleoside monophosphate metabolic process 4.27% (5/117) 4.27 6e-06 5.3e-05
GO:0009167 purine ribonucleoside monophosphate metabolic process 4.27% (5/117) 4.27 6e-06 5.3e-05
GO:0009123 nucleoside monophosphate metabolic process 4.27% (5/117) 4.27 6e-06 5.3e-05
GO:0009126 purine nucleoside monophosphate metabolic process 4.27% (5/117) 4.27 6e-06 5.3e-05
GO:0046034 ATP metabolic process 4.27% (5/117) 4.37 4e-06 5.4e-05
GO:0009260 ribonucleotide biosynthetic process 4.27% (5/117) 4.34 5e-06 5.4e-05
GO:0009152 purine ribonucleotide biosynthetic process 4.27% (5/117) 4.34 5e-06 5.4e-05
GO:0046390 ribose phosphate biosynthetic process 4.27% (5/117) 4.34 5e-06 5.4e-05
GO:0009199 ribonucleoside triphosphate metabolic process 4.27% (5/117) 4.3 5e-06 5.5e-05
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.27% (5/117) 4.3 5e-06 5.5e-05
GO:0009144 purine nucleoside triphosphate metabolic process 4.27% (5/117) 4.3 5e-06 5.5e-05
GO:0009141 nucleoside triphosphate metabolic process 4.27% (5/117) 4.24 7e-06 5.8e-05
GO:0072522 purine-containing compound biosynthetic process 4.27% (5/117) 4.21 7e-06 6.3e-05
GO:0008152 metabolic process 29.91% (35/117) 1.05 1.3e-05 0.000112
GO:1902494 catalytic complex 5.13% (6/117) 3.52 1.4e-05 0.000116
GO:0009165 nucleotide biosynthetic process 4.27% (5/117) 3.97 1.7e-05 0.000122
GO:0009259 ribonucleotide metabolic process 4.27% (5/117) 3.97 1.7e-05 0.000122
GO:1901293 nucleoside phosphate biosynthetic process 4.27% (5/117) 3.97 1.7e-05 0.000122
GO:0009150 purine ribonucleotide metabolic process 4.27% (5/117) 3.97 1.7e-05 0.000122
GO:0006163 purine nucleotide metabolic process 4.27% (5/117) 3.92 2e-05 0.000143
GO:0072521 purine-containing compound metabolic process 4.27% (5/117) 3.86 2.4e-05 0.000163
GO:0019693 ribose phosphate metabolic process 4.27% (5/117) 3.86 2.4e-05 0.000163
GO:1901137 carbohydrate derivative biosynthetic process 4.27% (5/117) 3.72 3.9e-05 0.000259
GO:0009987 cellular process 22.22% (26/117) 1.21 4e-05 0.000262
GO:0009117 nucleotide metabolic process 4.27% (5/117) 3.59 6e-05 0.000386
GO:0044237 cellular metabolic process 19.66% (23/117) 1.27 6.4e-05 0.000399
GO:0006753 nucleoside phosphate metabolic process 4.27% (5/117) 3.55 6.9e-05 0.000425
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.56% (3/117) 5.15 7.4e-05 0.000429
GO:0019898 extrinsic component of membrane 2.56% (3/117) 5.15 7.4e-05 0.000429
GO:0015986 ATP synthesis coupled proton transport 2.56% (3/117) 5.15 7.4e-05 0.000429
GO:0055086 nucleobase-containing small molecule metabolic process 4.27% (5/117) 3.36 0.00013 0.000739
GO:0017144 drug metabolic process 4.27% (5/117) 3.29 0.000163 0.000911
GO:0090407 organophosphate biosynthetic process 4.27% (5/117) 3.24 0.000192 0.001053
GO:0010207 photosystem II assembly 1.71% (2/117) 6.37 0.000214 0.001157
GO:1901135 carbohydrate derivative metabolic process 4.27% (5/117) 2.92 0.000539 0.002861
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.71% (2/117) 5.57 0.000741 0.003868
GO:0019438 aromatic compound biosynthetic process 5.13% (6/117) 2.46 0.000802 0.003923
GO:0008150 biological_process 33.33% (39/117) 0.7 0.000782 0.003951
GO:0019637 organophosphate metabolic process 4.27% (5/117) 2.79 0.0008 0.003973
GO:0005575 cellular_component 17.09% (20/117) 1.12 0.000782 0.004014
GO:0018130 heterocycle biosynthetic process 5.13% (6/117) 2.42 0.000924 0.004448
GO:1901362 organic cyclic compound biosynthetic process 5.13% (6/117) 2.32 0.001343 0.006362
GO:1902600 proton transmembrane transport 2.56% (3/117) 3.75 0.001426 0.006655
GO:0019829 cation-transporting ATPase activity 1.71% (2/117) 5.05 0.001569 0.006903
GO:0042625 ATPase coupled ion transmembrane transporter activity 1.71% (2/117) 5.05 0.001569 0.006903
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 1.71% (2/117) 5.05 0.001569 0.006903
GO:0022853 active ion transmembrane transporter activity 1.71% (2/117) 5.05 0.001569 0.006903
GO:0015078 proton transmembrane transporter activity 2.56% (3/117) 3.67 0.001663 0.007213
GO:0034654 nucleobase-containing compound biosynthetic process 4.27% (5/117) 2.54 0.001747 0.007472
GO:0015077 monovalent inorganic cation transmembrane transporter activity 2.56% (3/117) 3.44 0.002679 0.011301
GO:0015672 monovalent inorganic cation transport 2.56% (3/117) 3.29 0.003595 0.014965
GO:0098662 inorganic cation transmembrane transport 2.56% (3/117) 3.15 0.004683 0.018491
GO:0051188 cofactor biosynthetic process 2.56% (3/117) 3.15 0.004683 0.018491
GO:0098660 inorganic ion transmembrane transport 2.56% (3/117) 3.15 0.004683 0.018491
GO:0098655 cation transmembrane transport 2.56% (3/117) 3.15 0.004683 0.018491
GO:0016851 magnesium chelatase activity 0.85% (1/117) 7.37 0.006024 0.021576
GO:0010109 regulation of photosynthesis 0.85% (1/117) 7.37 0.006024 0.021576
GO:0010242 oxygen evolving activity 0.85% (1/117) 7.37 0.006024 0.021576
GO:0051002 ligase activity, forming nitrogen-metal bonds 0.85% (1/117) 7.37 0.006024 0.021576
GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes 0.85% (1/117) 7.37 0.006024 0.021576
GO:0042548 regulation of photosynthesis, light reaction 0.85% (1/117) 7.37 0.006024 0.021576
GO:0043467 regulation of generation of precursor metabolites and energy 0.85% (1/117) 7.37 0.006024 0.021576
GO:0042549 photosystem II stabilization 0.85% (1/117) 7.37 0.006024 0.021576
GO:0034220 ion transmembrane transport 2.56% (3/117) 3.01 0.006224 0.022036
GO:0009179 purine ribonucleoside diphosphate metabolic process 1.71% (2/117) 3.98 0.007012 0.022265
GO:0009185 ribonucleoside diphosphate metabolic process 1.71% (2/117) 3.98 0.007012 0.022265
GO:0006096 glycolytic process 1.71% (2/117) 3.98 0.007012 0.022265
GO:0046939 nucleotide phosphorylation 1.71% (2/117) 3.98 0.007012 0.022265
GO:0009135 purine nucleoside diphosphate metabolic process 1.71% (2/117) 3.98 0.007012 0.022265
GO:0046031 ADP metabolic process 1.71% (2/117) 3.98 0.007012 0.022265
GO:0006165 nucleoside diphosphate phosphorylation 1.71% (2/117) 3.98 0.007012 0.022265
GO:0042866 pyruvate biosynthetic process 1.71% (2/117) 3.98 0.007012 0.022265
GO:0006757 ATP generation from ADP 1.71% (2/117) 3.98 0.007012 0.022265
GO:0009132 nucleoside diphosphate metabolic process 1.71% (2/117) 3.98 0.007012 0.022265
GO:0016491 oxidoreductase activity 10.26% (12/117) 1.17 0.007101 0.022318
GO:0006090 pyruvate metabolic process 1.71% (2/117) 3.92 0.007683 0.023663
GO:0009166 nucleotide catabolic process 1.71% (2/117) 3.92 0.007683 0.023663
GO:1901566 organonitrogen compound biosynthetic process 5.13% (6/117) 1.77 0.008543 0.026053
GO:1901292 nucleoside phosphate catabolic process 1.71% (2/117) 3.79 0.009108 0.027502
GO:0019359 nicotinamide nucleotide biosynthetic process 1.71% (2/117) 3.67 0.010641 0.031214
GO:0019363 pyridine nucleotide biosynthetic process 1.71% (2/117) 3.67 0.010641 0.031214
GO:0034404 nucleobase-containing small molecule biosynthetic process 1.71% (2/117) 3.67 0.010641 0.031214
GO:0051186 cofactor metabolic process 2.56% (3/117) 2.69 0.011281 0.032779
GO:0072525 pyridine-containing compound biosynthetic process 1.71% (2/117) 3.62 0.011448 0.032952
GO:0046496 nicotinamide nucleotide metabolic process 1.71% (2/117) 3.57 0.01228 0.033178
GO:0019362 pyridine nucleotide metabolic process 1.71% (2/117) 3.57 0.01228 0.033178
GO:0022890 inorganic cation transmembrane transporter activity 2.56% (3/117) 2.66 0.01209 0.033248
GO:0042651 thylakoid membrane 0.85% (1/117) 6.37 0.012013 0.033333
GO:0004853 uroporphyrinogen decarboxylase activity 0.85% (1/117) 6.37 0.012013 0.033333
GO:0034357 photosynthetic membrane 0.85% (1/117) 6.37 0.012013 0.033333
GO:0004618 phosphoglycerate kinase activity 0.85% (1/117) 6.37 0.012013 0.033333
GO:0016052 carbohydrate catabolic process 1.71% (2/117) 3.52 0.013138 0.034586
GO:0006733 oxidoreduction coenzyme metabolic process 1.71% (2/117) 3.52 0.013138 0.034586
GO:0072524 pyridine-containing compound metabolic process 1.71% (2/117) 3.52 0.013138 0.034586
GO:0009055 electron transfer activity 2.56% (3/117) 2.58 0.013807 0.036038
GO:0006091 generation of precursor metabolites and energy 1.71% (2/117) 3.47 0.014022 0.036292
GO:0034622 cellular protein-containing complex assembly 1.71% (2/117) 3.37 0.015864 0.040717
GO:0034655 nucleobase-containing compound catabolic process 1.71% (2/117) 3.33 0.016822 0.042819
GO:0044271 cellular nitrogen compound biosynthetic process 5.13% (6/117) 1.55 0.017261 0.043223
GO:0005509 calcium ion binding 2.56% (3/117) 2.47 0.017129 0.043242
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 0.85% (1/117) 5.79 0.017965 0.043916
GO:0051920 peroxiredoxin activity 0.85% (1/117) 5.79 0.017965 0.043916
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 0.85% (1/117) 5.79 0.017965 0.043916
GO:0046434 organophosphate catabolic process 1.71% (2/117) 3.25 0.018809 0.045616
GO:0065003 protein-containing complex assembly 1.71% (2/117) 3.21 0.019838 0.047735
GO:0016830 carbon-carbon lyase activity 1.71% (2/117) 3.17 0.02089 0.049494
GO:0009058 biosynthetic process 6.84% (8/117) 1.24 0.020826 0.049724
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_98 0.162 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.197 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.071 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.068 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_23 0.064 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.073 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.064 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.122 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.051 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.04 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.072 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_128 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.055 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.046 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.092 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.092 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.058 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.076 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.179 Archaeplastida Compare
Zea mays HCCA Cluster_148 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.119 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.053 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.048 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.082 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.255 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.066 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.164 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_225 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.099 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.063 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.09 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.122 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.045 Archaeplastida Compare
Picea abies HCCA Cluster_343 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.112 Archaeplastida Compare
Picea abies HCCA Cluster_459 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.06 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.044 Archaeplastida Compare
Oryza sativa HCCA Cluster_148 0.188 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.049 Archaeplastida Compare
Oryza sativa HCCA Cluster_243 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_248 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.057 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.085 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_2 0.041 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.048 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.094 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_129 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.097 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_206 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.176 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_73 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_110 0.07 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.11 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.056 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_47 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.071 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.162 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.14 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.062 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.07 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.159 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_89 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.044 Archaeplastida Compare
Sequences (117) (download table)

InterPro Domains

GO Terms

Family Terms