Coexpression cluster: Cluster_265 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043229 intracellular organelle 20.63% (13/63) 3.36 0.0 0.0
GO:0043226 organelle 20.63% (13/63) 3.36 0.0 0.0
GO:0005840 ribosome 15.87% (10/63) 4.01 0.0 0.0
GO:1990904 ribonucleoprotein complex 15.87% (10/63) 3.86 0.0 0.0
GO:0044424 intracellular part 25.4% (16/63) 2.68 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 15.87% (10/63) 3.88 0.0 0.0
GO:0043228 non-membrane-bounded organelle 15.87% (10/63) 3.88 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 17.46% (11/63) 3.48 0.0 0.0
GO:0044464 cell part 25.4% (16/63) 2.63 0.0 0.0
GO:0009059 macromolecule biosynthetic process 17.46% (11/63) 3.4 0.0 0.0
GO:0032991 protein-containing complex 20.63% (13/63) 2.96 0.0 0.0
GO:0043043 peptide biosynthetic process 14.29% (9/63) 3.81 0.0 0.0
GO:0003735 structural constituent of ribosome 14.29% (9/63) 3.81 0.0 0.0
GO:0006412 translation 14.29% (9/63) 3.82 0.0 0.0
GO:0006518 peptide metabolic process 14.29% (9/63) 3.77 0.0 0.0
GO:0043604 amide biosynthetic process 14.29% (9/63) 3.78 0.0 0.0
GO:0043603 cellular amide metabolic process 14.29% (9/63) 3.73 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 17.46% (11/63) 3.2 0.0 0.0
GO:0005198 structural molecule activity 14.29% (9/63) 3.7 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 20.63% (13/63) 2.67 0.0 1e-06
GO:0044444 cytoplasmic part 15.87% (10/63) 3.06 0.0 3e-06
GO:1901566 organonitrogen compound biosynthetic process 14.29% (9/63) 3.17 1e-06 5e-06
GO:0044249 cellular biosynthetic process 17.46% (11/63) 2.74 1e-06 5e-06
GO:1901576 organic substance biosynthetic process 17.46% (11/63) 2.67 1e-06 8e-06
GO:0009058 biosynthetic process 17.46% (11/63) 2.53 3e-06 1.9e-05
GO:0044260 cellular macromolecule metabolic process 23.81% (15/63) 1.96 4e-06 3.1e-05
GO:0043170 macromolecule metabolic process 26.98% (17/63) 1.78 5e-06 3.2e-05
GO:0044267 cellular protein metabolic process 20.63% (13/63) 2.08 9e-06 5.9e-05
GO:0006807 nitrogen compound metabolic process 26.98% (17/63) 1.66 1.5e-05 9.3e-05
GO:0044237 cellular metabolic process 26.98% (17/63) 1.56 3.7e-05 0.000227
GO:0005575 cellular_component 25.4% (16/63) 1.58 5.5e-05 0.000324
GO:0019538 protein metabolic process 20.63% (13/63) 1.79 7.6e-05 0.000439
GO:0009987 cellular process 28.57% (18/63) 1.39 9.7e-05 0.000539
GO:0008270 zinc ion binding 9.52% (6/63) 2.92 0.000143 0.000771
GO:0044238 primary metabolic process 26.98% (17/63) 1.37 0.000179 0.000941
GO:0071704 organic substance metabolic process 26.98% (17/63) 1.31 0.000291 0.001489
GO:1901564 organonitrogen compound metabolic process 20.63% (13/63) 1.56 0.000366 0.00182
GO:0008380 RNA splicing 3.17% (2/63) 6.08 0.000397 0.001922
GO:0018022 peptidyl-lysine methylation 3.17% (2/63) 5.99 0.000449 0.002017
GO:0016571 histone methylation 3.17% (2/63) 5.99 0.000449 0.002017
GO:0034968 histone lysine methylation 3.17% (2/63) 5.99 0.000449 0.002017
GO:0008213 protein alkylation 3.17% (2/63) 5.83 0.000564 0.002412
GO:0006479 protein methylation 3.17% (2/63) 5.83 0.000564 0.002412
GO:0044422 organelle part 7.94% (5/63) 2.87 0.000609 0.002489
GO:0044446 intracellular organelle part 7.94% (5/63) 2.87 0.000609 0.002489
GO:0044427 chromosomal part 4.76% (3/63) 4.06 0.000785 0.003138
GO:0042054 histone methyltransferase activity 3.17% (2/63) 5.49 0.000904 0.003263
GO:0018024 histone-lysine N-methyltransferase activity 3.17% (2/63) 5.49 0.000904 0.003263
GO:0043414 macromolecule methylation 3.17% (2/63) 5.49 0.000904 0.003263
GO:0016278 lysine N-methyltransferase activity 3.17% (2/63) 5.49 0.000904 0.003263
GO:0016279 protein-lysine N-methyltransferase activity 3.17% (2/63) 5.49 0.000904 0.003263
GO:0008276 protein methyltransferase activity 3.17% (2/63) 5.44 0.000982 0.003475
GO:0018205 peptidyl-lysine modification 3.17% (2/63) 5.38 0.001063 0.003689
GO:0008170 N-methyltransferase activity 3.17% (2/63) 5.32 0.001146 0.003766
GO:0016569 covalent chromatin modification 3.17% (2/63) 5.32 0.001146 0.003766
GO:0016570 histone modification 3.17% (2/63) 5.32 0.001146 0.003766
GO:0032259 methylation 3.17% (2/63) 5.08 0.00161 0.005197
GO:0035145 exon-exon junction complex 1.59% (1/63) 9.08 0.001849 0.00567
GO:0005761 mitochondrial ribosome 1.59% (1/63) 9.08 0.001849 0.00567
GO:0000313 organellar ribosome 1.59% (1/63) 9.08 0.001849 0.00567
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.17% (2/63) 4.95 0.001924 0.005805
GO:0000278 mitotic cell cycle 1.59% (1/63) 8.08 0.003694 0.010964
GO:0046914 transition metal ion binding 9.52% (6/63) 1.92 0.005032 0.014697
GO:0007049 cell cycle 1.59% (1/63) 7.49 0.005536 0.015917
GO:0018193 peptidyl-amino acid modification 3.17% (2/63) 4.12 0.005923 0.016768
GO:0006325 chromatin organization 3.17% (2/63) 4.08 0.0063 0.017563
GO:0016070 RNA metabolic process 6.35% (4/63) 2.42 0.006746 0.018526
GO:0044815 DNA packaging complex 3.17% (2/63) 3.93 0.007701 0.019681
GO:0032993 protein-DNA complex 3.17% (2/63) 3.93 0.007701 0.019681
GO:0005634 nucleus 4.76% (3/63) 2.91 0.007543 0.019828
GO:0000775 chromosome, centromeric region 1.59% (1/63) 7.08 0.007375 0.019957
GO:0000786 nucleosome 3.17% (2/63) 3.95 0.007493 0.019982
GO:0008168 methyltransferase activity 4.76% (3/63) 2.88 0.007931 0.01999
GO:0016741 transferase activity, transferring one-carbon groups 4.76% (3/63) 2.82 0.008845 0.021993
GO:0098687 chromosomal region 1.59% (1/63) 6.76 0.009211 0.022597
GO:0046872 metal ion binding 11.11% (7/63) 1.54 0.01009 0.024429
GO:0043169 cation binding 11.11% (7/63) 1.53 0.01025 0.024494
GO:0008152 metabolic process 26.98% (17/63) 0.83 0.011411 0.026919
GO:0004843 thiol-dependent ubiquitin-specific protease activity 1.59% (1/63) 6.08 0.014697 0.034231
GO:0090304 nucleic acid metabolic process 6.35% (4/63) 2.05 0.015928 0.036635
GO:0006351 transcription, DNA-templated 3.17% (2/63) 3.3 0.017743 0.039814
GO:0097659 nucleic acid-templated transcription 3.17% (2/63) 3.3 0.017743 0.039814
GO:0000398 mRNA splicing, via spliceosome 1.59% (1/63) 5.49 0.021966 0.046456
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.59% (1/63) 5.49 0.021966 0.046456
GO:0000375 RNA splicing, via transesterification reactions 1.59% (1/63) 5.49 0.021966 0.046456
GO:0043231 intracellular membrane-bounded organelle 4.76% (3/63) 2.34 0.021529 0.04716
GO:0043227 membrane-bounded organelle 4.76% (3/63) 2.34 0.021529 0.04716
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_53 0.043 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_60 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_91 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_117 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_137 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_164 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_230 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_13 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.054 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_95 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_113 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_181 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_218 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_242 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_254 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_265 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.039 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_152 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_121 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.053 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_29 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_86 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.066 Archaeplastida Compare
Zea mays HCCA Cluster_249 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_331 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_340 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_360 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.04 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_178 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_2 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.064 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_104 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.071 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_252 0.066 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_280 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_182 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_273 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_477 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_505 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.042 Archaeplastida Compare
Oryza sativa HCCA Cluster_172 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_184 0.039 Archaeplastida Compare
Oryza sativa HCCA Cluster_209 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_212 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_307 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_39 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.043 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_199 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_120 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_144 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_270 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_1 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_37 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.068 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_114 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_168 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_215 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_231 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.065 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_149 0.019 Archaeplastida Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms