Coexpression cluster: Cluster_376 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 10.71% (6/56) 5.47 0.0 1e-06
GO:0006298 mismatch repair 5.36% (3/56) 7.55 1e-06 1.4e-05
GO:0030983 mismatched DNA binding 5.36% (3/56) 7.55 1e-06 1.4e-05
GO:0090304 nucleic acid metabolic process 12.5% (7/56) 3.99 0.0 1.6e-05
GO:0033554 cellular response to stress 7.14% (4/56) 5.63 1e-06 1.8e-05
GO:0006974 cellular response to DNA damage stimulus 7.14% (4/56) 5.63 1e-06 1.8e-05
GO:0051716 cellular response to stimulus 7.14% (4/56) 5.63 1e-06 1.8e-05
GO:0006281 DNA repair 7.14% (4/56) 5.77 1e-06 2e-05
GO:0006139 nucleobase-containing compound metabolic process 12.5% (7/56) 3.56 2e-06 2.5e-05
GO:0006260 DNA replication 5.36% (3/56) 6.52 5e-06 4.8e-05
GO:0046483 heterocycle metabolic process 12.5% (7/56) 3.39 5e-06 5e-05
GO:0006725 cellular aromatic compound metabolic process 12.5% (7/56) 3.34 6e-06 5.2e-05
GO:1901360 organic cyclic compound metabolic process 12.5% (7/56) 3.26 8e-06 6.6e-05
GO:0034641 cellular nitrogen compound metabolic process 12.5% (7/56) 2.92 3.7e-05 0.000279
GO:0003677 DNA binding 10.71% (6/56) 2.91 0.000147 0.00103
GO:0003690 double-stranded DNA binding 5.36% (3/56) 4.77 0.000191 0.001252
GO:0006950 response to stress 7.14% (4/56) 3.43 0.00053 0.003271
GO:0005634 nucleus 5.36% (3/56) 4.09 0.000746 0.004351
GO:0034645 cellular macromolecule biosynthetic process 7.14% (4/56) 3.27 0.000808 0.004466
GO:0009059 macromolecule biosynthetic process 7.14% (4/56) 3.16 0.001055 0.00554
GO:0043231 intracellular membrane-bounded organelle 5.36% (3/56) 3.83 0.001263 0.00603
GO:0043227 membrane-bounded organelle 5.36% (3/56) 3.83 0.001263 0.00603
GO:0043138 3'-5' DNA helicase activity 1.79% (1/56) 9.22 0.00168 0.00767
GO:0050896 response to stimulus 7.14% (4/56) 2.95 0.001838 0.008039
GO:0008608 attachment of spindle microtubules to kinetochore 1.79% (1/56) 8.63 0.002519 0.010174
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 1.79% (1/56) 8.63 0.002519 0.010174
GO:0031262 Ndc80 complex 1.79% (1/56) 8.22 0.003358 0.013057
GO:0003676 nucleic acid binding 10.71% (6/56) 1.91 0.005131 0.01924
GO:0044260 cellular macromolecule metabolic process 12.5% (7/56) 1.68 0.006012 0.021766
GO:1903047 mitotic cell cycle process 1.79% (1/56) 7.05 0.007539 0.026387
GO:0043229 intracellular organelle 5.36% (3/56) 2.73 0.010518 0.033466
GO:0043226 organelle 5.36% (3/56) 2.73 0.010518 0.033466
GO:0044249 cellular biosynthetic process 7.14% (4/56) 2.23 0.010438 0.035353
GO:1901576 organic substance biosynthetic process 7.14% (4/56) 2.13 0.013107 0.040478
GO:0022402 cell cycle process 1.79% (1/56) 5.97 0.01585 0.047551
GO:0003678 DNA helicase activity 1.79% (1/56) 5.89 0.016678 0.048643
GO:0009987 cellular process 16.07% (9/56) 1.17 0.017203 0.048819
GO:0044424 intracellular part 7.14% (4/56) 1.97 0.018949 0.049742
GO:0043170 macromolecule metabolic process 12.5% (7/56) 1.36 0.018552 0.049948
GO:0009058 biosynthetic process 7.14% (4/56) 1.99 0.018094 0.049998
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_49 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_257 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_229 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_270 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_287 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.046 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_148 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_54 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.058 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.041 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.037 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_437 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_155 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_214 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_481 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_25 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.055 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_140 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.047 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_151 0.019 Archaeplastida Compare
Sequences (56) (download table)

InterPro Domains

GO Terms

Family Terms