Coexpression cluster: Cluster_456 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 8.0% (8/100) 7.63 0.0 0.0
GO:0015979 photosynthesis 8.0% (8/100) 7.68 0.0 0.0
GO:0009521 photosystem 7.0% (7/100) 7.54 0.0 0.0
GO:0009523 photosystem II 4.0% (4/100) 7.57 0.0 0.0
GO:0098796 membrane protein complex 7.0% (7/100) 4.65 0.0 0.0
GO:0032991 protein-containing complex 11.0% (11/100) 3.0 0.0 4e-06
GO:0009522 photosystem I 3.0% (3/100) 7.97 0.0 4e-06
GO:0044424 intracellular part 12.0% (12/100) 2.72 0.0 6e-06
GO:0044464 cell part 12.0% (12/100) 2.6 1e-06 1.2e-05
GO:0009538 photosystem I reaction center 2.0% (2/100) 8.38 1.3e-05 0.000202
GO:0019898 extrinsic component of membrane 2.0% (2/100) 7.21 8e-05 0.000926
GO:0009507 chloroplast 2.0% (2/100) 7.21 8e-05 0.000926
GO:0009536 plastid 2.0% (2/100) 7.21 8e-05 0.000926
GO:0009654 photosystem II oxygen evolving complex 2.0% (2/100) 6.8 0.000146 0.001572
GO:0005575 cellular_component 14.0% (14/100) 1.57 0.000257 0.002584
GO:1990204 oxidoreductase complex 2.0% (2/100) 6.29 0.000299 0.00282
GO:0044425 membrane part 7.0% (7/100) 2.2 0.000885 0.007862
GO:0003690 double-stranded DNA binding 3.0% (3/100) 3.93 0.001045 0.008764
GO:0009512 cytochrome b6f complex 1.0% (1/100) 9.38 0.001501 0.009442
GO:0004418 hydroxymethylbilane synthase activity 1.0% (1/100) 9.38 0.001501 0.009442
GO:0044237 cellular metabolic process 14.0% (14/100) 1.32 0.0014 0.010066
GO:0043226 organelle 5.0% (5/100) 2.63 0.00134 0.010117
GO:0043229 intracellular organelle 5.0% (5/100) 2.63 0.00134 0.010117
GO:0044444 cytoplasmic part 5.0% (5/100) 2.6 0.001488 0.010214
GO:0044271 cellular nitrogen compound biosynthetic process 5.0% (5/100) 2.49 0.002064 0.012468
GO:0030145 manganese ion binding 1.0% (1/100) 7.8 0.004496 0.026109
GO:0009987 cellular process 15.0% (15/100) 1.07 0.004935 0.027598
GO:0006817 phosphate ion transport 1.0% (1/100) 7.38 0.00599 0.031188
GO:0005315 inorganic phosphate transmembrane transporter activity 1.0% (1/100) 7.38 0.00599 0.031188
GO:0003735 structural constituent of ribosome 3.0% (3/100) 2.87 0.00821 0.037569
GO:0043043 peptide biosynthetic process 3.0% (3/100) 2.87 0.00821 0.037569
GO:0009059 macromolecule biosynthetic process 4.0% (4/100) 2.33 0.008568 0.038052
GO:0005840 ribosome 3.0% (3/100) 2.92 0.007572 0.038111
GO:0006412 translation 3.0% (3/100) 2.89 0.007887 0.038419
GO:0043604 amide biosynthetic process 3.0% (3/100) 2.8 0.009491 0.038733
GO:1901566 organonitrogen compound biosynthetic process 4.0% (4/100) 2.23 0.010703 0.039418
GO:0043232 intracellular non-membrane-bounded organelle 3.0% (3/100) 2.8 0.009402 0.039437
GO:0043228 non-membrane-bounded organelle 3.0% (3/100) 2.8 0.009402 0.039437
GO:0004089 carbonate dehydratase activity 1.0% (1/100) 6.57 0.010459 0.039482
GO:0006518 peptide metabolic process 3.0% (3/100) 2.77 0.009942 0.039508
GO:0005198 structural molecule activity 3.0% (3/100) 2.75 0.010406 0.040289
GO:0043603 cellular amide metabolic process 3.0% (3/100) 2.69 0.011569 0.040627
GO:1990904 ribonucleoprotein complex 3.0% (3/100) 2.7 0.01137 0.040879
GO:0070069 cytochrome complex 1.0% (1/100) 6.38 0.011944 0.04099
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_29 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.079 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.077 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.043 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_23 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.05 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_95 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_128 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_182 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.05 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.056 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.041 Archaeplastida Compare
Gingko biloba HCCA Cluster_269 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.079 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.056 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.069 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.112 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.044 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.047 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_178 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_4 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.089 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.056 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.057 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_282 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.05 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.045 Archaeplastida Compare
Oryza sativa HCCA Cluster_148 0.075 Archaeplastida Compare
Oryza sativa HCCA Cluster_243 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.065 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.039 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_40 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.062 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.093 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_110 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.056 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_47 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.048 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.075 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.05 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.066 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.085 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.043 Archaeplastida Compare
Sequences (100) (download table)

InterPro Domains

GO Terms

Family Terms