Coexpression cluster: Cluster_273 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 8.57% (6/70) 3.66 9e-06 0.00089
GO:0003676 nucleic acid binding 18.57% (13/70) 2.15 6e-06 0.00127
GO:0071824 protein-DNA complex subunit organization 2.86% (2/70) 5.99 0.000456 0.015796
GO:0005634 nucleus 5.71% (4/70) 3.41 0.000567 0.016837
GO:0034728 nucleosome organization 2.86% (2/70) 6.07 0.000408 0.016978
GO:0006413 translational initiation 2.86% (2/70) 5.71 0.000671 0.017452
GO:0003917 DNA topoisomerase type I activity 1.43% (1/70) 9.24 0.001659 0.019173
GO:0019905 syntaxin binding 1.43% (1/70) 9.24 0.001659 0.019173
GO:0043486 histone exchange 1.43% (1/70) 9.24 0.001659 0.019173
GO:0000149 SNARE binding 1.43% (1/70) 9.24 0.001659 0.019173
GO:0003724 RNA helicase activity 1.43% (1/70) 9.24 0.001659 0.019173
GO:0008290 F-actin capping protein complex 1.43% (1/70) 8.24 0.003316 0.020899
GO:1901879 regulation of protein depolymerization 1.43% (1/70) 8.24 0.003316 0.020899
GO:1902904 negative regulation of supramolecular fiber organization 1.43% (1/70) 8.24 0.003316 0.020899
GO:1901880 negative regulation of protein depolymerization 1.43% (1/70) 8.24 0.003316 0.020899
GO:0030835 negative regulation of actin filament depolymerization 1.43% (1/70) 8.24 0.003316 0.020899
GO:0051494 negative regulation of cytoskeleton organization 1.43% (1/70) 8.24 0.003316 0.020899
GO:0030834 regulation of actin filament depolymerization 1.43% (1/70) 8.24 0.003316 0.020899
GO:0051693 actin filament capping 1.43% (1/70) 8.24 0.003316 0.020899
GO:0043242 negative regulation of protein complex disassembly 1.43% (1/70) 8.24 0.003316 0.020899
GO:0030837 negative regulation of actin filament polymerization 1.43% (1/70) 8.24 0.003316 0.020899
GO:0031333 negative regulation of protein complex assembly 1.43% (1/70) 8.24 0.003316 0.020899
GO:0051016 barbed-end actin filament capping 1.43% (1/70) 8.24 0.003316 0.020899
GO:0032272 negative regulation of protein polymerization 1.43% (1/70) 8.24 0.003316 0.020899
GO:0043226 organelle 8.57% (6/70) 2.65 0.000402 0.02091
GO:0043229 intracellular organelle 8.57% (6/70) 2.65 0.000402 0.02091
GO:0043227 membrane-bounded organelle 5.71% (4/70) 3.17 0.001036 0.021552
GO:0043231 intracellular membrane-bounded organelle 5.71% (4/70) 3.17 0.001036 0.021552
GO:0071840 cellular component organization or biogenesis 5.71% (4/70) 2.91 0.002009 0.021998
GO:0044424 intracellular part 10.0% (7/70) 1.82 0.003621 0.02215
GO:0008135 translation factor activity, RNA binding 2.86% (2/70) 4.38 0.004224 0.023748
GO:0016859 cis-trans isomerase activity 2.86% (2/70) 4.38 0.004224 0.023748
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.86% (2/70) 4.38 0.004224 0.023748
GO:0044464 cell part 10.0% (7/70) 1.77 0.004486 0.024556
GO:0016043 cellular component organization 5.71% (4/70) 3.09 0.0013 0.024589
GO:0003743 translation initiation factor activity 2.86% (2/70) 5.11 0.001558 0.024935
GO:0043933 protein-containing complex subunit organization 2.86% (2/70) 4.26 0.004965 0.026478
GO:0016853 isomerase activity 4.29% (3/70) 3.73 0.001532 0.026548
GO:1901363 heterocyclic compound binding 22.86% (16/70) 0.98 0.005499 0.0279
GO:0097159 organic cyclic compound binding 22.86% (16/70) 0.98 0.005499 0.0279
GO:0010639 negative regulation of organelle organization 1.43% (1/70) 7.24 0.006621 0.031297
GO:0051129 negative regulation of cellular component organization 1.43% (1/70) 7.24 0.006621 0.031297
GO:0043044 ATP-dependent chromatin remodeling 1.43% (1/70) 7.24 0.006621 0.031297
GO:0006325 chromatin organization 2.86% (2/70) 4.59 0.003158 0.032838
GO:0016272 prefoldin complex 1.43% (1/70) 6.91 0.008269 0.038221
GO:0008064 regulation of actin polymerization or depolymerization 1.43% (1/70) 6.24 0.013198 0.042893
GO:0032271 regulation of protein polymerization 1.43% (1/70) 6.24 0.013198 0.042893
GO:0032535 regulation of cellular component size 1.43% (1/70) 6.24 0.013198 0.042893
GO:0032956 regulation of actin cytoskeleton organization 1.43% (1/70) 6.24 0.013198 0.042893
GO:0043254 regulation of protein complex assembly 1.43% (1/70) 6.24 0.013198 0.042893
GO:0051493 regulation of cytoskeleton organization 1.43% (1/70) 6.24 0.013198 0.042893
GO:0030833 regulation of actin filament polymerization 1.43% (1/70) 6.24 0.013198 0.042893
GO:0030832 regulation of actin filament length 1.43% (1/70) 6.24 0.013198 0.042893
GO:0032970 regulation of actin filament-based process 1.43% (1/70) 6.24 0.013198 0.042893
GO:0030684 preribosome 1.43% (1/70) 6.24 0.013198 0.042893
GO:1902903 regulation of supramolecular fiber organization 1.43% (1/70) 6.24 0.013198 0.042893
GO:0110053 regulation of actin filament organization 1.43% (1/70) 6.24 0.013198 0.042893
GO:0090066 regulation of anatomical structure size 1.43% (1/70) 6.24 0.013198 0.042893
GO:0006338 chromatin remodeling 1.43% (1/70) 6.65 0.009915 0.043877
GO:0032040 small-subunit processome 1.43% (1/70) 6.65 0.009915 0.043877
GO:0006265 DNA topological change 1.43% (1/70) 6.07 0.014835 0.046056
GO:0044087 regulation of cellular component biogenesis 1.43% (1/70) 6.07 0.014835 0.046056
GO:0003916 DNA topoisomerase activity 1.43% (1/70) 6.07 0.014835 0.046056
GO:1990904 ribonucleoprotein complex 4.29% (3/70) 2.52 0.015618 0.047772
GO:0034641 cellular nitrogen compound metabolic process 8.57% (6/70) 1.67 0.01157 0.048132
GO:0009987 cellular process 18.57% (13/70) 0.94 0.016092 0.04851
GO:0032991 protein-containing complex 7.14% (5/70) 1.87 0.011912 0.048584
GO:0071103 DNA conformation change 1.43% (1/70) 5.91 0.01647 0.048941
GO:0043244 regulation of protein complex disassembly 1.43% (1/70) 6.43 0.011558 0.049061
GO:0090304 nucleic acid metabolic process 5.71% (4/70) 2.03 0.016796 0.049206
GO:0004386 helicase activity 2.86% (2/70) 3.64 0.011415 0.049463
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_23 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_137 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_179 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_258 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_171 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_97 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_212 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.083 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_173 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_195 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_322 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_328 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_329 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_341 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_176 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_300 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_313 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_473 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_503 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_526 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_530 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_82 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_175 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.061 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_218 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_220 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_68 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_111 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_147 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_242 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.043 Archaeplastida Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms