Coexpression cluster: Cluster_61 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 8.95% (17/190) 5.68 0.0 0.0
GO:0009521 photosystem 8.42% (16/190) 5.74 0.0 0.0
GO:0015979 photosynthesis 8.42% (16/190) 5.64 0.0 0.0
GO:0009522 photosystem I 4.74% (9/190) 6.54 0.0 0.0
GO:0098796 membrane protein complex 8.95% (17/190) 4.12 0.0 0.0
GO:0033014 tetrapyrrole biosynthetic process 4.74% (9/190) 5.47 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 4.74% (9/190) 5.26 0.0 0.0
GO:0009538 photosystem I reaction center 2.63% (5/190) 6.54 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 3.68% (7/190) 5.26 0.0 0.0
GO:0009523 photosystem II 3.68% (7/190) 5.1 0.0 0.0
GO:1990204 oxidoreductase complex 3.68% (7/190) 4.89 0.0 0.0
GO:0006779 porphyrin-containing compound biosynthetic process 2.63% (5/190) 5.87 0.0 0.0
GO:0044425 membrane part 10.0% (19/190) 2.28 0.0 0.0
GO:0006778 porphyrin-containing compound metabolic process 2.63% (5/190) 5.54 0.0 1e-06
GO:0019898 extrinsic component of membrane 2.63% (5/190) 5.06 0.0 6e-06
GO:0004853 uroporphyrinogen decarboxylase activity 1.58% (3/190) 6.54 1e-06 2.7e-05
GO:0051188 cofactor biosynthetic process 3.68% (7/190) 3.6 2e-06 3.5e-05
GO:0032991 protein-containing complex 9.47% (18/190) 1.87 2e-06 4.5e-05
GO:0016830 carbon-carbon lyase activity 2.63% (5/190) 4.34 4e-06 7.2e-05
GO:0051186 cofactor metabolic process 3.68% (7/190) 3.26 8e-06 0.000143
GO:0016491 oxidoreductase activity 8.42% (16/190) 1.81 1.5e-05 0.000235
GO:1902494 catalytic complex 3.68% (7/190) 3.14 1.4e-05 0.000239
GO:0016831 carboxy-lyase activity 2.11% (4/190) 4.54 2.1e-05 0.000323
GO:1901566 organonitrogen compound biosynthetic process 5.79% (11/190) 2.09 6.2e-05 0.000911
GO:0019438 aromatic compound biosynthetic process 5.79% (11/190) 2.0 0.000106 0.001439
GO:0044424 intracellular part 9.47% (18/190) 1.46 0.000104 0.001473
GO:0048037 cofactor binding 5.79% (11/190) 1.98 0.000117 0.001535
GO:0018130 heterocycle biosynthetic process 5.79% (11/190) 1.96 0.000134 0.001693
GO:0008152 metabolic process 23.16% (44/190) 0.8 0.000149 0.001821
GO:0050662 coenzyme binding 4.21% (8/190) 2.38 0.000162 0.001917
GO:1901362 organic cyclic compound biosynthetic process 5.79% (11/190) 1.9 0.000191 0.002183
GO:0044464 cell part 9.47% (18/190) 1.38 0.000215 0.002382
GO:0044237 cellular metabolic process 17.37% (33/190) 0.88 0.000408 0.004374
GO:0009987 cellular process 18.42% (35/190) 0.75 0.001345 0.014007
GO:0008150 biological_process 26.84% (51/190) 0.58 0.001458 0.014748
GO:0055114 oxidation-reduction process 6.32% (12/190) 1.44 0.001662 0.016341
GO:0045047 protein targeting to ER 1.05% (2/190) 4.74 0.002313 0.017798
GO:0072657 protein localization to membrane 1.05% (2/190) 4.74 0.002313 0.017798
GO:0090150 establishment of protein localization to membrane 1.05% (2/190) 4.74 0.002313 0.017798
GO:0070972 protein localization to endoplasmic reticulum 1.05% (2/190) 4.74 0.002313 0.017798
GO:0006612 protein targeting to membrane 1.05% (2/190) 4.74 0.002313 0.017798
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.05% (2/190) 4.74 0.002313 0.017798
GO:0006613 cotranslational protein targeting to membrane 1.05% (2/190) 4.74 0.002313 0.017798
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.05% (2/190) 4.74 0.002313 0.017798
GO:0044249 cellular biosynthetic process 6.84% (13/190) 1.31 0.002364 0.017806
GO:0016829 lyase activity 3.68% (7/190) 1.98 0.0021 0.01956
GO:0016209 antioxidant activity 1.58% (3/190) 3.54 0.002073 0.019837
GO:0006605 protein targeting 1.05% (2/190) 4.54 0.003062 0.021254
GO:0006720 isoprenoid metabolic process 1.05% (2/190) 4.54 0.003062 0.021254
GO:0008299 isoprenoid biosynthetic process 1.05% (2/190) 4.54 0.003062 0.021254
GO:0044271 cellular nitrogen compound biosynthetic process 5.79% (11/190) 1.42 0.002924 0.021562
GO:1901576 organic substance biosynthetic process 6.84% (13/190) 1.26 0.003278 0.021897
GO:0003824 catalytic activity 22.63% (43/190) 0.59 0.003364 0.022055
GO:0005509 calcium ion binding 2.63% (5/190) 2.33 0.003246 0.022098
GO:0009055 electron transfer activity 1.58% (3/190) 3.22 0.003968 0.025539
GO:0072594 establishment of protein localization to organelle 1.05% (2/190) 4.22 0.004852 0.030135
GO:0033365 protein localization to organelle 1.05% (2/190) 4.22 0.004852 0.030135
GO:0070727 cellular macromolecule localization 1.05% (2/190) 4.09 0.005889 0.035333
GO:0034613 cellular protein localization 1.05% (2/190) 4.09 0.005889 0.035333
GO:0046872 metal ion binding 5.26% (10/190) 1.35 0.006205 0.03661
GO:0009058 biosynthetic process 6.84% (13/190) 1.14 0.006524 0.03786
GO:0043169 cation binding 5.26% (10/190) 1.33 0.006802 0.038839
GO:0005575 cellular_component 12.11% (23/190) 0.79 0.007114 0.039973
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 1.05% (2/190) 3.64 0.010931 0.04662
GO:0010242 oxygen evolving activity 0.53% (1/190) 6.54 0.01071 0.046805
GO:0016851 magnesium chelatase activity 0.53% (1/190) 6.54 0.01071 0.046805
GO:0042548 regulation of photosynthesis, light reaction 0.53% (1/190) 6.54 0.01071 0.046805
GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes 0.53% (1/190) 6.54 0.01071 0.046805
GO:0010109 regulation of photosynthesis 0.53% (1/190) 6.54 0.01071 0.046805
GO:0042549 photosystem II stabilization 0.53% (1/190) 6.54 0.01071 0.046805
GO:0043467 regulation of generation of precursor metabolites and energy 0.53% (1/190) 6.54 0.01071 0.046805
GO:0008883 glutamyl-tRNA reductase activity 0.53% (1/190) 6.54 0.01071 0.046805
GO:0015994 chlorophyll metabolic process 0.53% (1/190) 6.54 0.01071 0.046805
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity 0.53% (1/190) 6.54 0.01071 0.046805
GO:0015995 chlorophyll biosynthetic process 0.53% (1/190) 6.54 0.01071 0.046805
GO:0051002 ligase activity, forming nitrogen-metal bonds 0.53% (1/190) 6.54 0.01071 0.046805
GO:0004329 formate-tetrahydrofolate ligase activity 0.53% (1/190) 6.54 0.01071 0.046805
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 0.53% (1/190) 6.54 0.01071 0.046805
GO:0042651 thylakoid membrane 0.53% (1/190) 6.54 0.01071 0.046805
GO:0016744 transferase activity, transferring aldehyde or ketonic groups 0.53% (1/190) 6.54 0.01071 0.046805
GO:0034357 photosynthetic membrane 0.53% (1/190) 6.54 0.01071 0.046805
GO:0004655 porphobilinogen synthase activity 0.53% (1/190) 6.54 0.01071 0.046805
GO:0019693 ribose phosphate metabolic process 1.58% (3/190) 2.7 0.010897 0.047044
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_31 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.092 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.136 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.086 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_23 0.047 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_56 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.052 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.078 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.037 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_75 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_128 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.043 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_218 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_52 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.062 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.081 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.042 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.052 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.058 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.109 Archaeplastida Compare
Zea mays HCCA Cluster_168 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.072 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.159 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.07 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_4 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.178 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.07 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.049 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.062 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.058 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.067 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.053 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.04 Archaeplastida Compare
Picea abies HCCA Cluster_342 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_343 0.038 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.085 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.08 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.071 Archaeplastida Compare
Oryza sativa HCCA Cluster_148 0.095 Archaeplastida Compare
Oryza sativa HCCA Cluster_157 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_248 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_2 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.061 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.05 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.05 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_196 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.085 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_73 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_110 0.063 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.055 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_135 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.071 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_219 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.062 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.087 Archaeplastida Compare
Vitis vinifera HCCA Cluster_137 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.039 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.083 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.068 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.058 Archaeplastida Compare
Sequences (190) (download table)

InterPro Domains

GO Terms

Family Terms